HHsearch alignment for GI: 254780602 and conserved domain: COG1921
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism].
Probab=98.74 E-value=1.1e-08 Score=73.02 Aligned_cols=229 Identities=19% Similarity=0.156 Sum_probs=138.5
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 26656589749889999999999983887-56998778989999-99998642101333322332334543333222222
Q gi|254780602|r 33 VLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVAGISPLRE-AIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMA 110 (400)
Q Consensus 33 ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~-aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~ 110 (400)
T Consensus 29 v~~t~lG~s~--~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~---~~~~-~aea~~ivnnn~aAVll~~~a 102 (395)
T COG1921 29 VLMTNLGRSL--YSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELL---CGLT-GAEAAAIVNNNAAAVLLTLNA 102 (395)
T ss_pred HEECCCCCCC--CCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH---HCCC-CHHHEEEECCCHHHHHHHHHH
T ss_conf 1001278766--798999999998505430356401231357779999998---3664-403325678828999998763
Q ss_pred CCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCC-CCCCCCCC
Q ss_conf 233223222------23333232222222222222222222223222103331000122122012113542-10000123
Q gi|254780602|r 111 TVNMGDEVL------IPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSN-PSGVVYSQ 183 (400)
Q Consensus 111 ~~~~Gd~Vl------v~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~N-PTG~v~s~ 183 (400)
T Consensus 103 l~~~~-EvVis~g~lV~-gg~~~v~d~~~~aG~~l~EvG~tn----~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~~ 176 (395)
T COG1921 103 LAEGK-EVVVSRGELVE-GGAFRVPDIIRLAGAKLVEVGTTN----RTHLKDYELAINENTALLLKVHSSNYGFTGMLSE 176 (395)
T ss_pred HCCCC-EEEEECCCCCC-CCCCCHHHHHHHCCCEEEEECCCC----CCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCH
T ss_conf 20577-17997131156-889986679997197799815657----6778889988545870589995036661464559
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 33321112233333201110122110000012233222111233322574146544322344544422110122687531
Q gi|254780602|r 184 NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIV 263 (400)
Q Consensus 184 ~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~ 263 (400)
T Consensus 177 ~---~l~~i-a~~~~lpvivD~aSg~~v~~e~~l~~~la~G-----aDLV~~SgdKllg--GPqaGii~GkKelI~~lq~ 245 (395)
T COG1921 177 E---ELVEI-AHEKGLPVIVDLASGALVDKEPDLREALALG-----ADLVSFSGDKLLG--GPQAGIIVGKKELIEKLQS 245 (395)
T ss_pred H---HHHHH-HHHCCCCEEEECCCCCCCCCCCCHHHHHHCC-----CCEEEEECCHHCC--CCCCCEEECHHHHHHHHHH
T ss_conf 9---99999-9876997799667763003554456888607-----9789975401127--9854337424999999976
Q ss_pred HCCCCCCCCCCCCCCCCCCCC
Q ss_conf 001222332222222222223
Q gi|254780602|r 264 LQGQQTSGACSIAQWAAVEAL 284 (400)
Q Consensus 264 ~~~~~~~~~~~~~q~a~~~~l 284 (400)
T Consensus 246 ~~l~Ralrv~K~tla~l~~aL 266 (395)
T COG1921 246 HPLKRALRVDKETLAALEAAL 266 (395)
T ss_pred HHHHHHHHCCCHHHHHHHHHH
T ss_conf 213343315827689999999