HHsearch alignment for GI: 254780602 and conserved domain: COG1932
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism].
Probab=97.42 E-value=0.0022 Score=40.65 Aligned_cols=326 Identities=13% Similarity=0.103 Sum_probs=150.7
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCC-----C-CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCC
Q ss_conf 726656589749889999999999983887-5699-----8-7789899999999864210133332233233-454333
Q gi|254780602|r 32 DVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYT-----A-VAGISPLREAIVEKFRRDNDLHYTSDQIIVG-TGAKHV 103 (400)
Q Consensus 32 ~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~-----~-~~G~~~lR~aia~~~~~~~g~~~~~e~I~it-~G~~~~ 103 (400)
T Consensus 5 ~~~nFsaG-Pa-~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y-~VlflqGGat~q 81 (365)
T COG1932 5 RVYNFSAG-PA-ALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDY-KVLFLQGGATGQ 81 (365)
T ss_pred CCCCCCCC-CC-CCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC-EEEEECCCCHHH
T ss_conf 78887888-52-4898999999998863416786301221333888999999999899995799874-699974853789
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC-CCCCCCCCC--CCHHHHHHCCCCCCCCCEEECCCCC-CCC
Q ss_conf 32222222332232222333323222-222222222222-222222322--2103331000122122012113542-100
Q gi|254780602|r 104 IFNALMATVNMGDEVLIPRPYWVSYP-DMVALCGGIPVF-VDTQQDDNF--QVSPEKLEQAITPKTKWLFLNSPSN-PSG 178 (400)
Q Consensus 104 l~~~~~~~~~~Gd~Vlv~~P~y~~y~-~~~~~~g~~~~~-v~~~~~~~~--~~d~~~l~~~i~~~~k~i~l~nP~N-PTG 178 (400)
T Consensus 82 f~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~-~NeTi~G 158 (365)
T COG1932 82 FAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFC-WNETISG 158 (365)
T ss_pred HHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHCC--CCCCCCEEEEE-CCCCCCC
T ss_conf 99888864213575057662145768999998645653123200026766799822146--67775579993-4886121
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 00123333211122333332011101221100000122332221112333225741465443223445444221101226
Q gi|254780602|r 179 VVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLI 258 (400)
Q Consensus 179 ~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li 258 (400)
T Consensus 159 v~v~~--~----p~~~~--~~~~v~D~S-S~----------ilsr~iDvsk~dviyagaQKnlGpaG--ltvvIvr~~~l 217 (365)
T COG1932 159 VEVPE--L----PDIGS--DGLLVADAS-SA----------ILSRPIDVSKYDVIYAGAQKNLGPAG--LTVVIVRPDLL 217 (365)
T ss_pred EECCC--C----CCCCC--CCEEEEECC-CH----------HHCCCCCHHHCCEEEEEHHHCCCCCC--EEEEEECHHHH
T ss_conf 57168--8----98887--760899656-27----------75577775671358876211257655--39999868997
Q ss_pred HHHHHHC--------C----CCCCC-CCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEE-EECC
Q ss_conf 8753100--------1----22233-2222222222---223467643222222110000000245530477603-3027
Q gi|254780602|r 259 KSMIVLQ--------G----QQTSG-ACSIAQWAAV---EALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRY-MIPD 321 (400)
Q Consensus 259 ~~l~~~~--------~----~~~~~-~~~~~q~a~~---~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~-~~p~ 321 (400)
T Consensus 218 ~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk-~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~ 296 (365)
T COG1932 218 ERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLK-SQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKA 296 (365)
T ss_pred HCCCCCCCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 0113568961764312110488427848999999999999999-749999999988998999999987277533445521
Q ss_pred --CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE--ECCHHHHHHHHHHHHHHHH
Q ss_conf --408998626410233211332248989999999987397998350228997289996--2999999999999999998
Q gi|254780602|r 322 --GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY--AVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 322 --g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~--~~~~e~l~~al~rl~~~l~ 397 (400)
T Consensus 297 ~RS~mnV~f~~~-----------~~~ld~~fv~e-ae~~gl~~lkGhr--~vgGmRasiynA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 297 NRSRMNVTFTLV-----------DAELDKGFVAE-AEAAGLIYLKGHR--SVGGLRASIYNAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred HCCCEEEEEECC-----------CHHHHHHHHHH-HHHCCCCEECCCC--CCCCEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 215326898727-----------37777999999-9973774102664--778616654357788999999999999998
Q ss_pred HC
Q ss_conf 60
Q gi|254780602|r 398 SL 399 (400)
Q Consensus 398 ~l 399 (400)
T Consensus 363 ~~ 364 (365)
T COG1932 363 TY 364 (365)
T ss_pred HH
T ss_conf 60