HHsearch alignment for GI: 254780602 and conserved domain: KOG1360

>KOG1360 consensus.
Probab=98.46  E-value=3.6e-07  Score=63.71  Aligned_cols=220  Identities=15%  Similarity=0.138  Sum_probs=121.9

Q ss_pred             CHHHHHHCCCCC----CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             103331000122----1220121135421000012333321112233333201110122110000012233222111233
Q gi|254780602|r  152 VSPEKLEQAITP----KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSL  227 (400)
Q Consensus       152 ~d~~~l~~~i~~----~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~  227 (400)
T Consensus       287 ND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp---leelcDv-ah~yGAiTFlDEVHAVGlYG-~rGaGvgerdGvm  361 (570)
T KOG1360         287 NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP---LEELCDV-AHKYGAITFLDEVHAVGLYG-PRGAGVGERDGVM  361 (570)
T ss_pred             CCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC---HHHHHHH-HHHHCCEEEEEHHHHHCCCC-CCCCCCCCCCCCC
T ss_conf             99899999997579888826887664026777577---8999778-87717545310123100215-7778766567752


Q ss_pred             CCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCC
Q ss_conf             322574146544322344544422110122687531001222---33222222222222346--7643222222110000
Q gi|254780602|r  228 YERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQT---SGACSIAQWAAVEALNG--PQDFVVNNRKIFEYRR  302 (400)
Q Consensus       228 ~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~---~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r  302 (400)
T Consensus       362 ~kvDiIsGTLgKafGcVG---GYIAat~~LvDmiRSyAaGFIFTTSLPP~vl-~GAleaVr~lk~~eg-~~lR~~hqrnv  436 (570)
T KOG1360         362 HKVDIISGTLGKAFGCVG---GYIAATRKLVDMIRSYAAGFIFTTSLPPMVL-AGALEAVRILKSEEG-RVLRRQHQRNV  436 (570)
T ss_pred             HHHHHCCCCHHHHCCCCC---CEEHHHHHHHHHHHHHCCCEEEECCCCHHHH-HHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_conf             032200140455416654---2330044699999974686687337982888-728999999863254-78999999999


Q ss_pred             CCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CC--EEEEEE
Q ss_conf             00024553047760330274089986264102332113322489899999999873979983502289--97--289996
Q gi|254780602|r  303 DLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GP--SIRISY  378 (400)
Q Consensus       303 ~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~--~iRis~  378 (400)
T Consensus       437 ~~~kq~l~~~-GiPVi~~p-SHIiPv~vg----------da-~l~~~~sd~Li~~h~iYvQa-INyPTV~rG~E~LRiaP  502 (570)
T KOG1360         437 KYVKQLLMEL-GIPVIPNP-SHIIPVRVG----------DA-ALAKQASDILISKHNIYVQA-INYPTVARGTERLRIAP  502 (570)
T ss_pred             HHHHHHHHHC-CCCCCCCC-CCEEEEECC----------CH-HHHHHHHHHHHHHCCEEEEE-CCCCCCCCCCEEEECCC
T ss_conf             9999999874-98634788-653335506----------77-77777789988752757885-26874566601342179


Q ss_pred             EC--CHHHHHHHHHHHHHH
Q ss_conf             29--999999999999999
Q gi|254780602|r  379 AV--SDAILEEACVRIKRF  395 (400)
Q Consensus       379 ~~--~~e~l~~al~rl~~~  395 (400)
T Consensus       503 TP~HT~~mm~~lv~~l~~v  521 (570)
T KOG1360         503 TPHHTPQMMNILVNALLDV  521 (570)
T ss_pred             CCCCCHHHHHHHHHHHHHH
T ss_conf             9988789999999999999