HHsearch alignment for GI: 254780602 and conserved domain: PRK03566
>PRK03566 consensus.
Probab=100.00 E-value=0 Score=472.73 Aligned_cols=356 Identities=22% Similarity=0.334 Sum_probs=300.2
Q ss_pred HHHHHHCCCCHHHH-HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 88987389758999-99999999986997266565897498899999999999838875699877898999999998642
Q gi|254780602|r 5 SNILRRVQPSATLV-AAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 5 s~~~~~l~~s~~~~-~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
T Consensus 7 ~~~~~~l~~y~~g~~~~~~~~~~g--~~~~i~l~~NeNp~gp~~~v~~a~~~~~~~-~~~YPd~~~-~~Lr~aiA~~~-- 80 (365)
T PRK03566 7 PPGVRALSPYQPGKPIEELARELG--LSDIVKLASNENPLGPSPKALEAIRAALSE-LHRYPDGNG-FELKAALAEKL-- 80 (365)
T ss_pred CHHHCCCCCCCCCCCHHHHHHHHC--CCCEEEEECCCCCCCCCHHHHHHHHHHHHH-CCCCCCCCH-HHHHHHHHHHH--
T ss_conf 887527799889989899998709--988788218899989899999999998886-166959668-99999999997--
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 10133332233233454333322222223322322223333232222222222222222222223222103331000122
Q gi|254780602|r 84 DNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP 163 (400)
Q Consensus 84 ~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 163 (400)
T Consensus 81 ----gv~~~~I~v~~Gs~e~i~l~~~a~~~pGd~Vl~~~P~y~~Y~~~~~~~g~~~~~vp~~---~~~~dl~~l~~~i~~ 153 (365)
T PRK03566 81 ----GVPPEQITLGNGSNDLLELLARAFLGPGDEIIYSQYAFAVYPLATQAVGARAVEVPAK---DYGHDLEAMLAAITP 153 (365)
T ss_pred ----CCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCC---CCCCCHHHHHHHCCC
T ss_conf ----8486679987789999999999855899876766886689999999819748996176---767695889986388
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
T Consensus 154 ~~klv~l~nPnNPTG~~~~~~~l~~l~~~~-~~-~~~vV~DEaY~ef~~~~~~~~~~~~~-~~-~~n~iv~rSfSK~~gl 229 (365)
T PRK03566 154 KTRLVFIANPNNPTGTFLSAAELEAFLAKV-PP-DVLVVLDEAYTEYAAPEERPDSLAWL-KK-YPNLVVSRTFSKAYGL 229 (365)
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHC-CC-CCEEEEECCHHHHCCCCCCCCHHHHH-HH-CCCEEEEEECCHHCCC
T ss_conf 886899779999887735706589999754-56-74498524577750477777788876-41-3772598545452057
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 44544422110122687531001222332222222222223467643222222110000000245530477603302740
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGA 323 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~ 323 (400)
T Consensus 230 aGlRiGy~ia~~~li~~l~~~~~--p~~vn~~aq~aa~aaL~-~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~ps-~~ 304 (365)
T PRK03566 230 AGLRVGYAVSNPEIADLLNRVRQ--PFNVNSLALAAAVAALD-DDDFLAKSRELNRAGMQQLEAGFDAL-GLEYIPS-KG 304 (365)
T ss_pred CCHHHEEEECCHHHHHHHHHHCC--CCCCCHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCC-CC
T ss_conf 57301410169999999999618--88977999999999958-99999999999998999999999978-7988789-98
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 89986264102332113322489899999999873979983502289972899962999999999999999998
Q gi|254780602|r 324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~ 397 (400)
T Consensus 305 nF~l~~~~-------------~~~~~l~~~L~~-~gV~Vrp~~~fgl~~~lRis~g~~een-~~l~~aL~~il~ 363 (365)
T PRK03566 305 NFVTVDVG-------------RDAAAIYQALLR-QGVIVRPVAGYGMPNHLRVSIGLPEEN-ARFLAALKKVLA 363 (365)
T ss_pred EEEEEECC-------------CCHHHHHHHHHH-CCEEEEECCCCCCCCEEEEEECCHHHH-HHHHHHHHHHHC
T ss_conf 08999789-------------999999999997-791898689899989799995899999-999999999876