HHsearch alignment for GI: 254780602 and conserved domain: PRK04311
>PRK04311 selenocysteine synthase; Provisional.
Probab=98.89 E-value=1.8e-08 Score=71.72 Aligned_cols=332 Identities=16% Similarity=0.116 Sum_probs=177.4
Q ss_pred CCCHHHHHHHHHHHHC-CCCCCCCCCCCHHHHHH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8899999999999838-87569987789899999-999864210133332233233454333322222223322322223
Q gi|254780602|r 44 DMPENVKYAVVRAMER-GETKYTAVAGISPLREA-IVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIP 121 (400)
Q Consensus 44 ~~p~~i~~a~~~al~~-~~~~Y~~~~G~~~lR~a-ia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~ 121 (400)
T Consensus 99 pL~~~a~~~v~~~~~~YsnLE~dL~~G~RG~R~~~v~~ll~~ltg----aE~a~vVNNNAaAv~L~l~~la-~gkEviVS 173 (465)
T PRK04311 99 LLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCELTG----AEDALVVNNNAAAVLLALNALA-AGKEVIVS 173 (465)
T ss_pred CCCHHHHHHHHHHHCCCCHHHHECCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCHHHHHHHHHHHH-CCCEEEEE
T ss_conf 788999999999962872155220138898708999999998549----8737998284899999999862-79859996
Q ss_pred C------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf 3------3323222222222222222222222322210333100012212201211354210000123-33321112233
Q gi|254780602|r 122 R------PYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQ-NRLRALADVLV 194 (400)
Q Consensus 122 ~------P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~-~~l~~i~~~~a 194 (400)
T Consensus 174 RGelvEIGGsFRiPdim~~sGa~L~EVGtTNr----T~l~DY~~AI~~~Ta~llkvH~SN~~i~GFt~~v~~~eL~~l-~ 248 (465)
T PRK04311 174 RGELVEIGGAFRIPDVMRQAGAKLVEVGTTNR----THLRDYEDAINENTALLLKVHTSNYRIVGFTKEVSEAELAAL-G 248 (465)
T ss_pred CCCEEEECCCCCCHHHHHHCCCEEEECCCCCC----CCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH-H
T ss_conf 45356526765627899865988874376788----887999986495654899995687654674688999999999-9
Q ss_pred CCCCCEEECCCCCCCCCCCCC----C-CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 333201110122110000012----2-33222111233322574146544322344544422110122687531001222
Q gi|254780602|r 195 RNPHVHIISDDIYEHIVYRNC----Q-FSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQT 269 (400)
Q Consensus 195 ~~~~i~ii~De~Y~~l~~~~~----~-~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~ 269 (400)
T Consensus 249 ~~~~ip~~~DlGSG~l~-~~~~~gl~~Ep~v~~~l~--~GaDLVtFSGDKLLG--GPQAGIIvGkk~lI~~lkknPL~RA 323 (465)
T PRK04311 249 KEHGLPVVVDLGSGSLV-DLSQYGLPDEPTVQELLA--AGVDLVTFSGDKLLG--GPQAGIIVGKKELIERLKKHPLKRA 323 (465)
T ss_pred HHCCCCEEEECCCCCCC-CCCCCCCCCCCCHHHHHH--CCCCEEEEECCCCCC--CCCCCEEECHHHHHHHHHHCCCHHH
T ss_conf 87599279988875213-653126999998899997--299889985540147--9854337400999999986876142
Q ss_pred CCCCCCCCCCCCCCC----CCCC--------CCCCCCCCCCCCCCCCHHHHHHCCC-CC--EEEEC----CCCEEEEEEC
Q ss_conf 332222222222223----4676--------4322222211000000024553047-76--03302----7408998626
Q gi|254780602|r 270 SGACSIAQWAAVEAL----NGPQ--------DFVVNNRKIFEYRRDLCVAQLQGVP-GI--RYMIP----DGAFYLYPSC 330 (400)
Q Consensus 270 ~~~~~~~q~a~~~~l----~~~~--------~~~~~~~~~~~~~r~~~~~~L~~~~-g~--~~~~p----~g~~y~~~~~ 330 (400)
T Consensus 324 lRvDKltLaaLeaTL~~Yl~~~~~~~~IP~l~mLt~~~~~L~~rA~~l~~~l~~~~~~~~v~i~~~~s~vGGGslP~~~l 403 (465)
T PRK04311 324 LRVDKLTLAALEATLRLYLNPERLAEKIPTLRLLTRSPEELRARAERLAAALKAALGEFAVSVVPSFSQVGGGSLPVDRL 403 (465)
T ss_pred HCCCHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
T ss_conf 32599999999999999959210001176899875999999999999999987425784289997766457887878878
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE-ECCHHHHHHHHHHHHHHHH
Q ss_conf 410233211332248989999999987397998350228997289996-2999999999999999998
Q gi|254780602|r 331 QDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY-AVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~-~~~~e~l~~al~rl~~~l~ 397 (400)
T Consensus 404 pS~~---v~i~~~~~s~~~L~~~L-R~~~~PII~RI---~~d~~~LDlRTi~~~d~~~i~~~l~~il~ 464 (465)
T PRK04311 404 PSAA---LTLTPKGRSLEALAARL-RLLPPPVIGRI---EDGRLLLDLRTLEEEDEEALAAALLELLN 464 (465)
T ss_pred CEEE---EEEECCCCCHHHHHHHH-HCCCCCEEEEE---ECCEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 8679---99857999999999998-36999889999---88979999163897899999999999961