HHsearch alignment for GI: 254780602 and conserved domain: PRK04612
>PRK04612 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional.
Probab=99.52 E-value=5e-13 Score=99.39 Aligned_cols=337 Identities=14% Similarity=0.116 Sum_probs=176.1
Q ss_pred HCCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8699726656589--7498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r 28 SKGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 28 ~~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
T Consensus 37 ~dG~~ylD~~sg~~~~~lGh~hp~v~~Ai~~Q~~~l~--~~~~~~~~~~~~~lae~L~~~~~---~~~~v~f~~SGsEAv 111 (408)
T PRK04612 37 DQGREYLDLSSGIAVSGLGHNDPDLVAALTEQAGKLW--HTSNVFFSAPPLKLAEELVTASR---FAEKVFLCNSGTEAN 111 (408)
T ss_pred CCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCC--CCCCCCCCHHHHHHHHHHHHCCC---CCCEEEECCCHHHHH
T ss_conf 9889999924507751225898999999999986525--76675226589999999972268---876699718746899
Q ss_pred CCCCCCCC-------CCC--CCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCC--CHHHHHHCCCCC-CCCCE
Q ss_conf 22222223-------322--32222333323222222222222222----2222223222--103331000122-12201
Q gi|254780602|r 105 FNALMATV-------NMG--DEVLIPRPYWVSYPDMVALCGGIPVF----VDTQQDDNFQ--VSPEKLEQAITP-KTKWL 168 (400)
Q Consensus 105 ~~~~~~~~-------~~G--d~Vlv~~P~y~~y~~~~~~~g~~~~~----v~~~~~~~~~--~d~~~l~~~i~~-~~k~i 168 (400)
T Consensus 112 E~AlKlAr~y~~~~G~~~~k~~ii~~~~syHG~t~~als~t~~~~~~~~~~p~p~~~~~~~~~d~~~le~~~~~~~iAAv 191 (408)
T PRK04612 112 EAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLASVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAV 191 (408)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCCCEEEE
T ss_conf 99999999998732887777699998585259876742256784334688899885254366749999971569978999
Q ss_pred EECCCC-CCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 211354-2100001-23333211122333332011101221100000122332-22111233322574146544322344
Q gi|254780602|r 169 FLNSPS-NPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLYERTLVVNGVSKAYAMTG 245 (400)
Q Consensus 169 ~l~nP~-NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~~~~i~~~S~SK~~~~~G 245 (400)
T Consensus 192 iv-EPi~g~gG~~~~~~~yl~~l~~lc-~~~gillI~DEV~TGfGRtG~~fa~~~~~v~PD-----ii--~~gKglg-~G 261 (408)
T PRK04612 192 ML-EPIQGEGGVMPAAPGFLARVRALC-DQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPD-----IV--TLAKALG-GG 261 (408)
T ss_pred EE-ECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCC-----EE--EEEHHHC-CC
T ss_conf 99-786788883068999999999999-756946985012247886762035551289999-----89--9723223-88
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCC----CCCEEEE
Q ss_conf 544422110122687531001222332222222222223467--6432222221100000002455304----7760330
Q gi|254780602|r 246 LRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGV----PGIRYMI 319 (400)
Q Consensus 246 ~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~----~g~~~~~ 319 (400)
T Consensus 262 ~Pl~av~~~~~i~~~~~~~~h~~T~~gnpla~aaala~L~~i~~~~l~~~----~~~~g~~l~~~L~~l~~~~~~i~~vR 337 (408)
T PRK04612 262 FPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAAN----VARQSAALRAGLEALNAEFGVFAQIR 337 (408)
T ss_pred CCEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 76289998688885146899788887359999999999999986669999----99999999999999874079888322
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHH
Q ss_conf 2740899862641023321133224898999999998739799835022899728999--62999999999999999998
Q gi|254780602|r 320 PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 320 p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~ 397 (400)
T Consensus 338 G~-GLm~giel~~---------~~~~~~~~i~~~~-~~~Gll~~~~g----~~~irl~PPL~it~~eide~l~~l~~al~ 402 (408)
T PRK04612 338 GR-GLMLGAVLAP---------AHAGQAGAILDLA-AEHGLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALA 402 (408)
T ss_pred CC-CEEEEEEECC---------CCCCHHHHHHHHH-HHCCCEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 04-4699999547---------8862699999999-97891993179----99799968833889999999999999999
Q ss_pred H
Q ss_conf 6
Q gi|254780602|r 398 S 398 (400)
Q Consensus 398 ~ 398 (400)
T Consensus 403 ~ 403 (408)
T PRK04612 403 A 403 (408)
T ss_pred H
T ss_conf 9