HHsearch alignment for GI: 254780602 and conserved domain: PRK05839
>PRK05839 hypothetical protein; Provisional.
Probab=100.00 E-value=0 Score=580.64 Aligned_cols=363 Identities=23% Similarity=0.354 Sum_probs=317.1
Q ss_pred HCCCCHHHHHHHHHHHHHHC-CCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 38975899999999999986-99726656589749889999999999983887569987789899999999864210133
Q gi|254780602|r 10 RVQPSATLVAAQRVRDLRSK-GIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLH 88 (400)
Q Consensus 10 ~l~~s~~~~~~~~~~~~~~~-g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~ 88 (400)
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~dvi~L~iG~pdf~~P~~i~~A~~~~~~-~~~~Y~~~~G~peLR~Aia~~~~~~~g~~ 80 (376)
T PRK05839 2 TFEPYPFEKLRALLKEITPNKKGELLDLTIGEPQFETPKFIQDALKNNAH-LLNKYPKSAGEEELREAQRGFFKRRFNIE 80 (376)
T ss_pred CCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99997299999999741404899848796889999989999999998644-48977998782999999999999986899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 33223323345433332222222--3322322223333232222222222222222222223222103331000122122
Q gi|254780602|r 89 YTSDQIIVGTGAKHVIFNALMAT--VNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTK 166 (400)
Q Consensus 89 ~~~e~I~it~G~~~~l~~~~~~~--~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k 166 (400)
T Consensus 81 v~~~~I~vt~Ga~~al~~~~~~~l~~~~~~~i~~p~P~y~~y~~~~~~~g~~~v~v~l~~e~~~~~~l~~~~---~~~tk 157 (376)
T PRK05839 81 LKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKSLYMNLTKENDFTPSLNEKE---LQEVD 157 (376)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHH---HHCCC
T ss_conf 980249981788999999999984579998899789876325899986168632424640258886411876---50589
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC----CCCCCEEEEECCCCCCCC
Q ss_conf 0121135421000012333321112233333201110122110000012233222111----233322574146544322
Q gi|254780602|r 167 WLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVE----PSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 167 ~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~----~~~~~~~i~~~S~SK~~~ 242 (400)
T Consensus 158 ~iilnsP~NPTG~v~s~eel~~i~~la~-~~~~~iisDEiY~~l~~-~~~~~s~~~~~~~~~~~~~~~vi~i~s~SK~~~ 235 (376)
T PRK05839 158 LVILNSPNNPTGRTLSLEELISWVKLAL-KYDFILINDECYSEIYE-NTPPPSLLEASILAGNESFKNVLVINSISKRSS 235 (376)
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHC-CCEEEEEEECCHHHHHC-CCCCCCHHHHHHHHCCCCCCCEEEEECCHHHCC
T ss_conf 9998899899882363999999987514-73699998068288637-999876888656514553253799923203201
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCC
Q ss_conf 34454442211012268753100122233222222222222346764322222211000000024553047760330274
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDG 322 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g 322 (400)
T Consensus 236 ~~G~RiG~i~~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~a~~~-~~~~~~~r~~~~~~~~~~~~~------l~~~~P~g 308 (376)
T PRK05839 236 APGLRSGFIAGDSSILKKYKAYRTYLGCASPLPLQKAAAVAWLD-DEHAEFFRNIYAKNLKLAREI------LGITIPPY 308 (376)
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHH------CCCCCCCE
T ss_conf 46540699978999999999865643678519999999999729-668999999999999999875------39888980
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC----CCEEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 089986264102332113322489899999999873979983502289----9728999629999999999999999986
Q gi|254780602|r 323 AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH----GPSIRISYAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 323 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~----~~~iRis~~~~~e~l~~al~rl~~~l~~ 398 (400)
T Consensus 309 ~fy~~~~~~--------------d~~~f~~~Ll~~~gV~v~PG~~FG~~~~g~~~vRls~~~~~e~L~eal~Rl~~f~e~ 374 (376)
T PRK05839 309 TFYVWLPVQ--------------NDENFTKKLYQNEGIKVLPGSYLGRNGIGKDYVRLALVYDTPKLKKALERIKTYREN 374 (376)
T ss_pred EEEEEEECC--------------CHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 379986689--------------989999999980999997740017999989969999708899999999999999986
Q ss_pred C
Q ss_conf 0
Q gi|254780602|r 399 L 399 (400)
Q Consensus 399 l 399 (400)
T Consensus 375 ~ 375 (376)
T PRK05839 375 H 375 (376)
T ss_pred C
T ss_conf 6