HHsearch alignment for GI: 254780602 and conserved domain: PRK05839

>PRK05839 hypothetical protein; Provisional.
Probab=100.00  E-value=0  Score=580.64  Aligned_cols=363  Identities=23%  Similarity=0.354  Sum_probs=317.1

Q ss_pred             HCCCCHHHHHHHHHHHHHHC-CCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             38975899999999999986-99726656589749889999999999983887569987789899999999864210133
Q gi|254780602|r   10 RVQPSATLVAAQRVRDLRSK-GIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLH   88 (400)
Q Consensus        10 ~l~~s~~~~~~~~~~~~~~~-g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~   88 (400)
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~dvi~L~iG~pdf~~P~~i~~A~~~~~~-~~~~Y~~~~G~peLR~Aia~~~~~~~g~~   80 (376)
T PRK05839          2 TFEPYPFEKLRALLKEITPNKKGELLDLTIGEPQFETPKFIQDALKNNAH-LLNKYPKSAGEEELREAQRGFFKRRFNIE   80 (376)
T ss_pred             CCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             99997299999999741404899848796889999989999999998644-48977998782999999999999986899


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf             33223323345433332222222--3322322223333232222222222222222222223222103331000122122
Q gi|254780602|r   89 YTSDQIIVGTGAKHVIFNALMAT--VNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTK  166 (400)
Q Consensus        89 ~~~e~I~it~G~~~~l~~~~~~~--~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k  166 (400)
T Consensus        81 v~~~~I~vt~Ga~~al~~~~~~~l~~~~~~~i~~p~P~y~~y~~~~~~~g~~~v~v~l~~e~~~~~~l~~~~---~~~tk  157 (376)
T PRK05839         81 LKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKSLYMNLTKENDFTPSLNEKE---LQEVD  157 (376)
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHH---HHCCC
T ss_conf             980249981788999999999984579998899789876325899986168632424640258886411876---50589


Q ss_pred             CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC----CCCCCEEEEECCCCCCCC
Q ss_conf             0121135421000012333321112233333201110122110000012233222111----233322574146544322
Q gi|254780602|r  167 WLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVE----PSLYERTLVVNGVSKAYA  242 (400)
Q Consensus       167 ~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~----~~~~~~~i~~~S~SK~~~  242 (400)
T Consensus       158 ~iilnsP~NPTG~v~s~eel~~i~~la~-~~~~~iisDEiY~~l~~-~~~~~s~~~~~~~~~~~~~~~vi~i~s~SK~~~  235 (376)
T PRK05839        158 LVILNSPNNPTGRTLSLEELISWVKLAL-KYDFILINDECYSEIYE-NTPPPSLLEASILAGNESFKNVLVINSISKRSS  235 (376)
T ss_pred             EEEECCCCCCCCCCCCHHHHHHHHHHHC-CCEEEEEEECCHHHHHC-CCCCCCHHHHHHHHCCCCCCCEEEEECCHHHCC
T ss_conf             9998899899882363999999987514-73699998068288637-999876888656514553253799923203201


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCC
Q ss_conf             34454442211012268753100122233222222222222346764322222211000000024553047760330274
Q gi|254780602|r  243 MTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDG  322 (400)
Q Consensus       243 ~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g  322 (400)
T Consensus       236 ~~G~RiG~i~~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~a~~~-~~~~~~~r~~~~~~~~~~~~~------l~~~~P~g  308 (376)
T PRK05839        236 APGLRSGFIAGDSSILKKYKAYRTYLGCASPLPLQKAAAVAWLD-DEHAEFFRNIYAKNLKLAREI------LGITIPPY  308 (376)
T ss_pred             CCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHH------CCCCCCCE
T ss_conf             46540699978999999999865643678519999999999729-668999999999999999875------39888980


Q ss_pred             CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC----CCEEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf             089986264102332113322489899999999873979983502289----9728999629999999999999999986
Q gi|254780602|r  323 AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH----GPSIRISYAVSDAILEEACVRIKRFCHS  398 (400)
Q Consensus       323 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~----~~~iRis~~~~~e~l~~al~rl~~~l~~  398 (400)
T Consensus       309 ~fy~~~~~~--------------d~~~f~~~Ll~~~gV~v~PG~~FG~~~~g~~~vRls~~~~~e~L~eal~Rl~~f~e~  374 (376)
T PRK05839        309 TFYVWLPVQ--------------NDENFTKKLYQNEGIKVLPGSYLGRNGIGKDYVRLALVYDTPKLKKALERIKTYREN  374 (376)
T ss_pred             EEEEEEECC--------------CHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
T ss_conf             379986689--------------989999999980999997740017999989969999708899999999999999986


Q ss_pred             C
Q ss_conf             0
Q gi|254780602|r  399 L  399 (400)
Q Consensus       399 l  399 (400)
T Consensus       375 ~  375 (376)
T PRK05839        375 H  375 (376)
T ss_pred             C
T ss_conf             6