HHsearch alignment for GI: 254780602 and conserved domain: PRK05939

Probab=99.69  E-value=2e-16  Score=120.09  Aligned_cols=180  Identities=18%  Similarity=0.254  Sum_probs=116.0

Q ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             98899999999999838875699877-89899999999864210133332233233454333322222223322322223
Q gi|254780602|r   43 FDMPENVKYAVVRAMERGETKYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIP  121 (400)
Q Consensus        43 ~~~p~~i~~a~~~al~~~~~~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~  121 (400)
T Consensus        21 f~~~~~~~~----~~~~~~~~~~YsR~~nP-T~~~le~~la~LEg----g~~a~~~sSGMaAi~~~l~~ll~~Gd~il~~   91 (396)
T PRK05939         21 FEDARDLID----VFQGKKAGFTYARQGTP-TTAALEAKITEMEG----GVGTVCFATGMAAIAAVFLTLLRAGDHLVSS   91 (396)
T ss_pred             ECCHHHHHH----HHCCCCCCCEEECCCCH-HHHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHCCCCCEEEEC
T ss_conf             499899999----85588589634089986-79999999999829----9749996579999999999835889889953


Q ss_pred             CCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             33323222222---222222222222222322210333100012212201211354210000123333211122333332
Q gi|254780602|r  122 RPYWVSYPDMV---ALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPH  198 (400)
Q Consensus       122 ~P~y~~y~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~  198 (400)
T Consensus        92 ~~~YG~t~~l~~~l~~~GI~v~~vd~-------~d~~~~~~ai~~~Tklv~~EspsNP~l~v~D---i~~i~~ia-~~~g  160 (396)
T PRK05939         92 QYLFGNTNSLLGTLQGLGVEVTMVDA-------TDVQQVAAAIRPNTRMVFVETIANPGTQVAD---LAGIGALC-RERG  160 (396)
T ss_pred             CCCCCHHHHHHHHHHHCCEEEEEECC-------CCHHHHHHHHCCCCCEEEEEECCCCCCCCCC---HHHHHHHH-HHCC
T ss_conf             88692299999986531869999889-------7989999861856618999808999870758---99999999-9839


Q ss_pred             CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC-CCC
Q ss_conf             011101221100000122332221112333225741465443223445444-221
Q gi|254780602|r  199 VHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIG-YAA  252 (400)
Q Consensus       199 i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG-~~v  252 (400)
T Consensus       161 ~~~vVDNT~atP~~----~~Pl-~~--G---aDivvhS~TKyi~GhsD~l~G~vv  205 (396)
T PRK05939        161 LVYVVDNTMTSPWL----FRPK-SV--G---ASLVINSLSKYIAGHGNALGGAVT  205 (396)
T ss_pred             CEEEEECCCCHHHH----CCHH-HH--C---CCEEEEECCCCCCCCCCEEEEEEE
T ss_conf             97999777630420----5855-63--8---988998343302588774769996