HHsearch alignment for GI: 254780602 and conserved domain: PRK05942

Probab=100.00  E-value=0  Score=666.84  Aligned_cols=385  Identities=23%  Similarity=0.367  Sum_probs=363.9

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHH
Q ss_conf             3678898738975899999999999986997266565897498899999999999838875-699877898999999998
Q gi|254780602|r    2 VFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGET-KYTAVAGISPLREAIVEK   80 (400)
Q Consensus         2 ~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~-~Y~~~~G~~~lR~aia~~   80 (400)
T Consensus         6 ~~~~~r~~~~~~~~~~~~~~~a~~~~~~G~~vi~L~iG~Pd~~~P~~v~~a~~~al~~~~~~~Y~~~~G~~~LReaia~~   85 (394)
T PRK05942          6 ISPADRLQALPPYVFARLDELKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALEDPQNHGYPPFEGTASFRQAITDW   85 (394)
T ss_pred             CCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             78889975299998999999999998659981888598999988899999999998388888989976859999999999


Q ss_pred             HHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf             642101333322-3323345433332222222332232222333323222222222222222222222322210333100
Q gi|254780602|r   81 FRRDNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQ  159 (400)
Q Consensus        81 ~~~~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~  159 (400)
T Consensus        86 ~~~~~g~~~~p~~~v~vt~Ga~~al~~~~~al~~pGD~Vlv~~P~Yp~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~  165 (394)
T PRK05942         86 YHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPE  165 (394)
T ss_pred             HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHH
T ss_conf             99986898898875998888899999999995799898997888867689999985998999970587688779999998


Q ss_pred             CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf             01221220121135421000012333321112233333201110122110000012233222111233322574146544
Q gi|254780602|r  160 AITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSK  239 (400)
Q Consensus       160 ~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK  239 (400)
T Consensus       166 ~i~~~tk~iil~~P~NPTG~v~~~e~l~~i~~~a-~~~~i~vIsDEiY~~l~~dg~~~~s~~~~-~~~~~~~i~~~S~SK  243 (394)
T PRK05942        166 EVAQQAKILYFNYPSNPTTATAPREFFEEIVAFA-RKYEILLVHDLCYAELAFDGYQPTSLLEI-PGAKDIGVEFHTLSK  243 (394)
T ss_pred             HHHCCCCEEEEECCCCCCCHHCCHHHHHHHHHHH-HCCCCEEEECCCCCCEEECCCCCCCHHHC-CCCCCCCEEECCCCC
T ss_conf             6112670899938988101220199999999988-51786797037410025568766557655-465344216603334


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE
Q ss_conf             32234454442211012268753100122233222222222222346764322222211000000024553047760330
Q gi|254780602|r  240 AYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMI  319 (400)
Q Consensus       240 ~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~  319 (400)
T Consensus       244 ~~~~~G~RiG~ii~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~rrd~l~~~L~~~-g~~~~~  322 (394)
T PRK05942        244 TYNMAGWRVGFVVGNRDIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRQRRDFLIQGLGEL-GWDIPP  322 (394)
T ss_pred             CCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECC
T ss_conf             5678774259986799999999999985345767699999999985847789999999999999999989876-967537


Q ss_pred             CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf             274089986264102332113322489899999999873979983502289--972899962999999999999999998
Q gi|254780602|r  320 PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFCH  397 (400)
Q Consensus       320 p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l~  397 (400)
T Consensus       323 p~g~~y~w~~~~~-----------~~~~~~f~~~ll~~~gV~v~PG~~Fg~~g~~~iRlsf~~~~~~l~ea~~Rl~~a~~  391 (394)
T PRK05942        323 TKATMYLWVPCPV-----------GMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALHRIKQAGI  391 (394)
T ss_pred             CCEEEEEEEECCC-----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
T ss_conf             8858899886899-----------97989999999984999998873117899987999971889999999999999998


Q ss_pred             HCC
Q ss_conf             609
Q gi|254780602|r  398 SLQ  400 (400)
Q Consensus       398 ~l~  400 (400)
T Consensus       392 ry~  394 (394)
T PRK05942        392 RYQ  394 (394)
T ss_pred             HHC
T ss_conf             529