HHsearch alignment for GI: 254780602 and conserved domain: PRK06460

Probab=99.74  E-value=1.4e-17  Score=127.12  Aligned_cols=223  Identities=16%  Similarity=0.177  Sum_probs=144.0

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCC
Q ss_conf             5699877898999999998642101333322332334543333222222233223222233332322222----222222
Q gi|254780602|r   62 TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGG  137 (400)
Q Consensus        62 ~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~  137 (400)
T Consensus        37 y~Y~R-~gnPT-~~~le~~la~LEg----~~~a~~~~SGmaAi~~~l~~~l~~Gdhiv~~~~~Yg~t~~l~~~~l~~~Gv  110 (375)
T PRK06460         37 YRYSR-EVNPT-VLKLAEKIAELEE----AEMGVAFSSGMGAISTTLLTLLKPGSSVLIHRDMFGRSYRFFTDFLRNWGV  110 (375)
T ss_pred             CEEEC-CCCHH-HHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCE
T ss_conf             25638-98877-9999999999819----980899535999999999997289998997178758679999999873786


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf             22222222223222103331000122122012113542100001233332111223333320111012211000001223
Q gi|254780602|r  138 IPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF  217 (400)
Q Consensus       138 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~  217 (400)
T Consensus       111 ~v~~~d~-------~~~~~~~~~~~~~Tklv~~EspsNP~l~v~D---i~~i~~ia-~~~gi~~vVDNT~atP~~----~  175 (375)
T PRK06460        111 KVEVARP-------GEENILEKIKNKRYDVVFVETISNPLLRVID---IPELSKAC-KENGALLIVDSTFATPIN----Q  175 (375)
T ss_pred             EEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCCCCC---CHHHHHHH-HHCCCEEEEECCCCCCCC----C
T ss_conf             7797389-------9999999734767608999889998764058---58999999-874993897567414122----8


Q ss_pred             CCCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             3222111233322574146544322344-544422110122687531001222332222222222223467643222222
Q gi|254780602|r  218 SNIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK  296 (400)
Q Consensus       218 ~s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~  296 (400)
T Consensus       176 ~Pl-~~--G---aDivvhS~TKyi~GhsD~l~Gvv~~~~~~~~~l~~~~~~~G~~lsP~~a~l~~rGl~T----L~lR~~  245 (375)
T PRK06460        176 KPL-VQ--G---ADIVIHSASKFIAGHNDVIAGLAAGSYELMKKIDLMRRTLGTSLDPHAAYLTIRGIKT----LKIRMD  245 (375)
T ss_pred             CHH-HH--C---CCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC----HHHHHH
T ss_conf             814-51--7---9889995564346788734034248199999999998642787881668888636998----999999


Q ss_pred             CCCCCCCCHHHHHHCCCCC
Q ss_conf             1100000002455304776
Q gi|254780602|r  297 IFEYRRDLCVAQLQGVPGI  315 (400)
Q Consensus       297 ~~~~~r~~~~~~L~~~~g~  315 (400)
T Consensus       246 ~~~~nA~~lA~~L~~hp~V  264 (375)
T PRK06460        246 VINSNAQKIAEFLQEHPKV  264 (375)
T ss_pred             HHHHHHHHHHHHHHHCCCC
T ss_conf             9999999999999748981