HHsearch alignment for GI: 254780602 and conserved domain: PRK08249

Probab=99.80  E-value=6.1e-19  Score=135.44  Aligned_cols=226  Identities=15%  Similarity=0.176  Sum_probs=145.3

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCC
Q ss_conf             5699877898999999998642101333322332334543333222222233223222233332322222----222222
Q gi|254780602|r   62 TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGG  137 (400)
Q Consensus        62 ~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~  137 (400)
T Consensus        54 ~g~~YsR~~nPT~~~lE~~la~LEg----~~~a~~~~SGmaAis~~l~~ll~~Gd~vv~~~~~YggT~~l~~~~l~~~Gi  129 (398)
T PRK08249         54 PGHIYSRNTNPTVQALEAKVKELEG----AEAATSFSTGMAAISNTLYTFLSPGDRVVSIKDTYGGTNKIFEEFLPRMGV  129 (398)
T ss_pred             CCCEEECCCCHHHHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCE
T ss_conf             8951408988659999999999829----970899647899999999997189998998189843799999976015986


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf             22222222223222103331000122122012113542100001233332111223333320111012211000001223
Q gi|254780602|r  138 IPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF  217 (400)
Q Consensus       138 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~  217 (400)
T Consensus       130 ~v~fvd~-------~d~~~~~~ai~~~Tklv~~EtpsNP~l~v~D---i~~ia~i-A~~~g~~~vVDNTfatP~~----~  194 (398)
T PRK08249        130 DVTLCET-------GDHEQIEREIAKGCDLLYLETPTNPTLKITD---IRRLSAA-AHEVGALVVVDNTFATPIN----Q  194 (398)
T ss_pred             EEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEEEC---HHHHHHH-HHHCCCEEEEECCCCHHHC----C
T ss_conf             9998799-------9869999855888618998448999746664---7999999-9874996998477420312----7


Q ss_pred             CCCCCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             322211123332257414654432234454-4422110122687531001222332222222222223467643222222
Q gi|254780602|r  218 SNIVNVEPSLYERTLVVNGVSKAYAMTGLR-IGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK  296 (400)
Q Consensus       218 ~s~~~~~~~~~~~~i~~~S~SK~~~~~G~R-iG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~  296 (400)
T Consensus       195 ~Pl-~~--G---aDivvhS~TKyi~GHsDvlgGvv~~~~~~~~~l~~~~~~~G~~lsP~~a~L~~RGL~T----L~lRm~  264 (398)
T PRK08249        195 NPL-AL--G---ADLVVHSATKFLGGHADALGGVVCGPEALMAQVYHYREINGATLDPFAAYLILRGMKT----LALRVR  264 (398)
T ss_pred             CCC-CC--C---CCEEEECCCCEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC----HHHHHH
T ss_conf             821-15--7---9879972662003687635105608899999999999704887891778998646897----999999


Q ss_pred             CCCCCCCCHHHHHHCCCCCE
Q ss_conf             11000000024553047760
Q gi|254780602|r  297 IFEYRRDLCVAQLQGVPGIR  316 (400)
Q Consensus       297 ~~~~~r~~~~~~L~~~~g~~  316 (400)
T Consensus       265 r~~~nA~~vA~~L~~hp~V~  284 (398)
T PRK08249        265 QQQENAMALAEYLQTEPLVE  284 (398)
T ss_pred             HHHHHHHHHHHHHHHCCCCC
T ss_conf             99889999999998399807