HHsearch alignment for GI: 254780602 and conserved domain: PRK08466
>PRK08466 consensus.
Probab=99.44 E-value=3.9e-12 Score=93.99 Aligned_cols=339 Identities=13% Similarity=0.110 Sum_probs=180.3
Q ss_pred HCCCCEEECCCC--CCCCC-CCHHHHHHHHHHHHCCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 869972665658--97498-8999999999998388756998778-9899999999864210133332233233454333
Q gi|254780602|r 28 SKGIDVLCLTAG--EPDFD-MPENVKYAVVRAMERGETKYTAVAG-ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 28 ~~g~~ii~l~~G--~p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G-~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
T Consensus 43 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~--~~~~~~~~~~~~~~lae~L~~~~p~--~l~~v~f~~sGseA 118 (430)
T PRK08466 43 FDGNAYIDCISSWWVNLFGHCNPYINEAIKKQIDELE--HVILAGFTHEPIIKLSERLCELTPR--GLNKCFYADNGSSA 118 (430)
T ss_pred CCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCC--CCCCCCCCCHHHHHHHHHHHHHCCC--CCCEEEEECCHHHH
T ss_conf 9989999924377976114797999999999996577--7345775877999999999985788--77879983771999
Q ss_pred CCCCCCCC----CC--CC-CCCCCCCCCCCCCCCCC-CCCCC--------------CCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 32222222----33--22-32222333323222222-22222--------------222222222232221033310001
Q gi|254780602|r 104 IFNALMAT----VN--MG-DEVLIPRPYWVSYPDMV-ALCGG--------------IPVFVDTQQDDNFQVSPEKLEQAI 161 (400)
Q Consensus 104 l~~~~~~~----~~--~G-d~Vlv~~P~y~~y~~~~-~~~g~--------------~~~~v~~~~~~~~~~d~~~l~~~i 161 (400)
T Consensus 119 ~E~AiKlAr~y~~~~g~~k~~iis~~~~yHG~T~ga~s~~~~~~~~~~~~p~~~~~~~~p~p~~~-~~~~~~~~~l~~~l 197 (430)
T PRK08466 119 IEVALKMSFHYHKNKGKKKSLFLSLSNSYHGETLGALSVGDVALYKDTYKPLLLECLQTPVPKDD-EAYQEALEALKRIL 197 (430)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHH
T ss_conf 99999999999752268975899964752688521102578400246778877686115899971-66788899999999
Q ss_pred CC---CCCCEEECCC--CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEE
Q ss_conf 22---1220121135--4210000-12333321112233333201110122110000012233-2221112333225741
Q gi|254780602|r 162 TP---KTKWLFLNSP--SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVV 234 (400)
Q Consensus 162 ~~---~~k~i~l~nP--~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~ 234 (400)
T Consensus 198 ~~~~~~iAAvI~-EPiiqg~gg~~~~~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~~~~gv~PD-----iv- 269 (430)
T PRK08466 198 EKHAEEICAFIL-EPLVQCAGNMHMYSAEYLKEAIKLC-HKYNIHIIFDEIAVGFGRTGTMFALEQCGISPD-----FL- 269 (430)
T ss_pred HHCCCCEEEEEE-ECCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEEEEECCCCCCCCCHHHHHCCCCCC-----EE-
T ss_conf 858997779999-7876677997689889999999998-535966887310117876676205541699998-----89-
Q ss_pred CCCCCCCCCCC-CCCCCCCCHHHHHHHHHHH--------CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCC
Q ss_conf 46544322344-5444221101226875310--------01222332222222222223467--6432222221100000
Q gi|254780602|r 235 NGVSKAYAMTG-LRIGYAAGALSLIKSMIVL--------QGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRD 303 (400)
Q Consensus 235 ~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~--------~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~ 303 (400)
T Consensus 270 -~~gK~l~-gG~~Pisav~~~~ei~~~~~~~~~~~~~~~h~-~T~~Gnpla~aaala~L~~l~~~~l~~~----~~~~g~ 342 (430)
T PRK08466 270 -CLSKGIT-GGYLPLSVVLTSDEIYNAFYAPYEENKAFLHS-HSYTGNALACAAANATLDIFEDENVIEK----NQILSE 342 (430)
T ss_pred -EECCCCC-CCCCCEEEEEECHHHHHHHHCCCCCCCCEECC-CCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHH
T ss_conf -8684101-78877499998589998750565556660126-5788897999999999999996888899----999999
Q ss_pred CHHHHHHC---CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--E
Q ss_conf 00245530---477603302740899862641023321133224898999999998739799835022899728999--6
Q gi|254780602|r 304 LCVAQLQG---VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--Y 378 (400)
Q Consensus 304 ~~~~~L~~---~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~ 378 (400)
T Consensus 343 ~l~~~L~~l~~~~~v~~vRg~-Gl~~~iel~~~~~-------~~~~~~~i~~~~l-~~Gll~~~~-----g~~l~~~PpL 408 (430)
T PRK08466 343 FIQKELSRLEKLDFVGNLRQC-GMVFAFELLGTDT-------KERVGLFVFQKAL-KKGLLLRPL-----GNTIYFMPPY 408 (430)
T ss_pred HHHHHHHHHHCCCCEEEEEEC-CEEEEEEEECCCC-------CHHHHHHHHHHHH-HCCEEEECC-----CCEEEEECCC
T ss_conf 999999986249975788412-5389999845885-------0379999999999-789389114-----9999997985
Q ss_pred ECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 2999999999999999998609
Q gi|254780602|r 379 AVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 379 ~~~~e~l~~al~rl~~~l~~l~ 400 (400)
T Consensus 409 ~it~eeid~~~~~l~~al~elk 430 (430)
T PRK08466 409 IITKEEIKKVIEVLEEIIKELK 430 (430)
T ss_pred CCCHHHHHHHHHHHHHHHHHHC
T ss_conf 8899999999999999999739