HHsearch alignment for GI: 254780602 and conserved domain: PRK08776
>PRK08776 cystathionine gamma-synthase; Provisional.
Probab=99.70 E-value=8.5e-17 Score=122.36 Aligned_cols=223 Identities=15% Similarity=0.181 Sum_probs=138.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCC
Q ss_conf 6998778989999999986421013333223323345433332222222332232222333323222----222222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYP----DMVALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~----~~~~~~g~~ 138 (400)
T Consensus 53 ~YsR-~gNP-T~~~lE~~lA~LEg----g~~a~~~sSGmaAi~~~l~~ll~~GDhiv~~~~~YGgT~~l~~~~~~~~gi~ 126 (405)
T PRK08776 53 DYTR-SGNP-TRDLLGEALAELEG----GAGGVITSTGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFA 126 (405)
T ss_pred EECC-CCCH-HHHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEE
T ss_conf 3418-9887-89999999999829----9968994679999999999973899989986886117999999987548889
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS 218 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~ 218 (400)
T Consensus 127 ~~~vd~-------~d~~~~~~~i~~~Tklv~~EtpsNP~l~v~D---i~~ia~iA-~~~g~~~vVDNTfatP~~----~~ 191 (405)
T PRK08776 127 LITADL-------TDPRSLADALAQSPKLVLIETPSNPLLRITD---LRFVIEAA-HKVGALTVVDNTFLSPAL----QK 191 (405)
T ss_pred EEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEEEC---CHHHHHHH-HHCCCEEEEECCCCCCCC----CC
T ss_conf 999689-------9989999743777659999889999886027---59999999-873997999799764002----68
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2221112333225741465443223445-44422110-122687531001222332222222222223467643222222
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTGL-RIGYAAGA-LSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK 296 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~v~~-~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 296 (400)
T Consensus 192 Pl-~~-----GaDivihS~TKyl~GHsDvl~G~vv~~~~~~~~~l~~~~~~~G~~~sP~da~L~lRGLkT----L~lRm~ 261 (405)
T PRK08776 192 PL-EF-----GADLVLHSTTKYINGHSDVVGGAVVARDAALHQQLVWWANALGLTGSPFDAFLTLRGLRT----LDARLR 261 (405)
T ss_pred HH-HH-----CCCEEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC----HHHHHH
T ss_conf 26-52-----797899972604327865305622268889999999999860888883357888645788----999999
Q ss_pred CCCCCCCCHHHHHHCCCCCE
Q ss_conf 11000000024553047760
Q gi|254780602|r 297 IFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 297 ~~~~~r~~~~~~L~~~~g~~ 316 (400)
T Consensus 262 r~~~nA~~lA~~L~~hp~V~ 281 (405)
T PRK08776 262 VHQENADAIAALLDGHAAVN 281 (405)
T ss_pred HHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999997098968