HHsearch alignment for GI: 254780602 and conserved domain: PRK08776

>PRK08776 cystathionine gamma-synthase; Provisional.
Probab=99.70  E-value=8.5e-17  Score=122.36  Aligned_cols=223  Identities=15%  Similarity=0.181  Sum_probs=138.2

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCC
Q ss_conf             6998778989999999986421013333223323345433332222222332232222333323222----222222222
Q gi|254780602|r   63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYP----DMVALCGGI  138 (400)
Q Consensus        63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~----~~~~~~g~~  138 (400)
T Consensus        53 ~YsR-~gNP-T~~~lE~~lA~LEg----g~~a~~~sSGmaAi~~~l~~ll~~GDhiv~~~~~YGgT~~l~~~~~~~~gi~  126 (405)
T PRK08776         53 DYTR-SGNP-TRDLLGEALAELEG----GAGGVITSTGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFA  126 (405)
T ss_pred             EECC-CCCH-HHHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEE
T ss_conf             3418-9887-89999999999829----9968994679999999999973899989986886117999999987548889


Q ss_pred             CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf             22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r  139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS  218 (400)
Q Consensus       139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~  218 (400)
T Consensus       127 ~~~vd~-------~d~~~~~~~i~~~Tklv~~EtpsNP~l~v~D---i~~ia~iA-~~~g~~~vVDNTfatP~~----~~  191 (405)
T PRK08776        127 LITADL-------TDPRSLADALAQSPKLVLIETPSNPLLRITD---LRFVIEAA-HKVGALTVVDNTFLSPAL----QK  191 (405)
T ss_pred             EEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEEEC---CHHHHHHH-HHCCCEEEEECCCCCCCC----CC
T ss_conf             999689-------9989999743777659999889999886027---59999999-873997999799764002----68


Q ss_pred             CCCCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2221112333225741465443223445-44422110-122687531001222332222222222223467643222222
Q gi|254780602|r  219 NIVNVEPSLYERTLVVNGVSKAYAMTGL-RIGYAAGA-LSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK  296 (400)
Q Consensus       219 s~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~v~~-~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~  296 (400)
T Consensus       192 Pl-~~-----GaDivihS~TKyl~GHsDvl~G~vv~~~~~~~~~l~~~~~~~G~~~sP~da~L~lRGLkT----L~lRm~  261 (405)
T PRK08776        192 PL-EF-----GADLVLHSTTKYINGHSDVVGGAVVARDAALHQQLVWWANALGLTGSPFDAFLTLRGLRT----LDARLR  261 (405)
T ss_pred             HH-HH-----CCCEEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC----HHHHHH
T ss_conf             26-52-----797899972604327865305622268889999999999860888883357888645788----999999


Q ss_pred             CCCCCCCCHHHHHHCCCCCE
Q ss_conf             11000000024553047760
Q gi|254780602|r  297 IFEYRRDLCVAQLQGVPGIR  316 (400)
Q Consensus       297 ~~~~~r~~~~~~L~~~~g~~  316 (400)
T Consensus       262 r~~~nA~~lA~~L~~hp~V~  281 (405)
T PRK08776        262 VHQENADAIAALLDGHAAVN  281 (405)
T ss_pred             HHHHHHHHHHHHHHHCCCCC
T ss_conf             99999999999997098968