HHsearch alignment for GI: 254780602 and conserved domain: PRK09331
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional.
Probab=99.65 E-value=5.8e-16 Score=117.30 Aligned_cols=334 Identities=16% Similarity=0.163 Sum_probs=184.2
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCC--CCC-------CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 97266565897498899999999999838875--699-------877898999999998642101333322332334543
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMERGET--KYT-------AVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAK 101 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~--~Y~-------~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~ 101 (400)
T Consensus 17 ~~~in~~piq~gg~lt~ea~ka~~~~g-dgysvcd~C~~~LD~i~~Ppi~~f~~~la~fl----g~----D~~rlvnGar 87 (386)
T PRK09331 17 EEMINLDPIQRGGRLTPEARKALIEYG-DGYSVCDYCKGRLDKIEKPPIADFHEDLAKFL----GM----DEARVTPGAR 87 (386)
T ss_pred HCCCCCCHHHHCCCCCHHHHHHHHHHC-CCCCHHHHHCCHHHCCCCCCHHHHHHHHHHHH----CC----CEEEECCCCC
T ss_conf 313356735526968999999999974-88736645411011255998899999999984----99----6378528842
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHH----HHHHCCCCC--CCCCEEECCCC
Q ss_conf 33322222223322322223333-232222222222222222222223222103----331000122--12201211354
Q gi|254780602|r 102 HVIFNALMATVNMGDEVLIPRPY-WVSYPDMVALCGGIPVFVDTQQDDNFQVSP----EKLEQAITP--KTKWLFLNSPS 174 (400)
Q Consensus 102 ~~l~~~~~~~~~~Gd~Vlv~~P~-y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~----~~l~~~i~~--~~k~i~l~nP~ 174 (400)
T Consensus 88 ~g~qAv~~a~c~~GD~VIl~rnaHyS~~-~A~elaG~~~~~v~~~~~~~~~I~~~~~~~~Iee~~~e~gk~~aL~ll--t 164 (386)
T PRK09331 88 EGKFAVMHALCKKGDYVVLDGLAHYTSY-VAAERAGLNVREVPKTGYPDYRITPEAYAEKIEEVEDETGKPPALALL--T 164 (386)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCHHHHH-HHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE--E
T ss_conf 7899999986369997984484059999-999975985899368777234508005799999999861898559999--6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH
Q ss_conf 21000012333321112233333201110122110000012233222111233322574146544322344544422110
Q gi|254780602|r 175 NPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGA 254 (400)
Q Consensus 175 NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 254 (400)
T Consensus 165 ~pdy~yGn~~d~~~i~~ia-h~~~ip~lvdeA~~~----~~~P~~a~~~--Ga---D~~v~S~HK~~~s~t-~sgvL~~~ 233 (386)
T PRK09331 165 HVDGNYGNLHDAKKIAKVA-HQYGIPLLLNGAYTV----GRMPVDGKEL--GA---DFIVGSGHKSMAASA-PSGVLATT 233 (386)
T ss_pred CCCCCCCCHHHHHHHHHHH-HHCCCCEEEECCCCC----CCCCCCHHHC--CC---CEEEEECCCCCCCCC-CCEEEECC
T ss_conf 8886644546389999999-874981898144335----7789746663--99---889863454442346-31244304
Q ss_pred HHHHHHHHH-----------HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE--ECC
Q ss_conf 122687531-----------0012223322222222222234676432222221100000002455304776033--027
Q gi|254780602|r 255 LSLIKSMIV-----------LQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM--IPD 321 (400)
Q Consensus 255 ~~li~~l~~-----------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~--~p~ 321 (400)
T Consensus 234 ~e~~d~v~R~s~~~~~Kev~mLgcTs~g~psy~LMA---Sfd~vrerv~~~-d~ev~~ar~~~~El~kIeG~~~lge~P~ 309 (386)
T PRK09331 234 EEYADKVFRTSKKFGVKEVELLGCTLRGAPLVTLMA---SFPHVKERVKNW-DEEVEKARWFVDELEKIEGFKQLGEKPR 309 (386)
T ss_pred CCHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHH---CCHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCHHHCCCCCC
T ss_conf 530155652264305789988536334640899980---659999999877-8999999999999860876554065778
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEE-CCCCCCCCCEEE-EEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 408998626410233211332248989999999987397998-350228997289-996299999999999999999860
Q gi|254780602|r 322 GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVV-QGSSFGHGPSIR-ISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 322 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~-pG~~Fg~~~~iR-is~~~~~e~l~~al~rl~~~l~~l 399 (400)
T Consensus 310 ~hdl~~fdtt~~~---~ia~~~~~~Gy~l~~~-Lk~r~I~ge~sg~----t~~lkl~s~G~t~E~v~~li~A~keIaeky 381 (386)
T PRK09331 310 NHDLMRFETPSFD---EIAKKHKRRGFFLYEE-LKKRGIHGIKPGL----TKEFKLSTYGLTWEQVEYVADSFKEIAEKY 381 (386)
T ss_pred CCCCEEECCCCEE---EEHHHCCCCCEEHHHH-HHHCCCEEEECCC----CEEEEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 7774353376412---2232048660567999-9767964995571----017878861787899999999999999982