HHsearch alignment for GI: 254780602 and conserved domain: PRK13578
>PRK13578 ornithine decarboxylase; Provisional.
Probab=98.71 E-value=3.4e-08 Score=69.93 Aligned_cols=151 Identities=18% Similarity=0.216 Sum_probs=85.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCC---------CHHHHHHCCCCC
Q ss_conf 3233454333322222223322322223333232222-222222222222222223222---------103331000122
Q gi|254780602|r 94 IIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD-MVALCGGIPVFVDTQQDDNFQ---------VSPEKLEQAITP 163 (400)
Q Consensus 94 I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~-~~~~~g~~~~~v~~~~~~~~~---------~d~~~l~~~i~~ 163 (400)
T Consensus 193 yFvvNGTS~~nk~v~~a~~~pGD~VLvdRN~HKSv~~GALIlsGA~PVYl~p~rN-~~GiiggI~~~~f~~~~i~~~I~~ 271 (720)
T PRK13578 193 YFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARN-PFGFIGGIDAHCFDEEYLREQIRE 271 (720)
T ss_pred EEEECCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEECCCCC-CCCEECCCCHHHCCHHHHHHHHHH
T ss_conf 9995771088999999745899999965643577777889866976799666467-565116748575275778988874
Q ss_pred ---------CC-CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CCCCCC--CCCCC-CCCCCCCCC
Q ss_conf ---------12-20121135421000012333321112233333201110122110-000012--23322-211123332
Q gi|254780602|r 164 ---------KT-KWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEH-IVYRNC--QFSNI-VNVEPSLYE 229 (400)
Q Consensus 164 ---------~~-k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~-l~~~~~--~~~s~-~~~~~~~~~ 229 (400)
T Consensus 272 ~~~~~a~~~~p~~~aVit~~-TYdGi~yn~~~I~---~~i~~~-~~~ilfDEAw~~~~~F~P~~~d~~p~~l~~gadd-p 345 (720)
T PRK13578 272 VAPERADEARPFRLAIIQLG-TYDGTIYNARQVV---DKIGHL-CDYILFDSAWVGYEQFIPMMADCSPLLLELNEND-P 345 (720)
T ss_pred HCHHHHCCCCCCEEEEEECC-CCCCEEECHHHHH---HHHHHH-CCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCC-C
T ss_conf 36333123488618999468-7535423499999---998640-7838985110214432853112464333458777-6
Q ss_pred EEEEECCCCCCCCCCCCCCC-CCCC
Q ss_conf 25741465443223445444-2211
Q gi|254780602|r 230 RTLVVNGVSKAYAMTGLRIG-YAAG 253 (400)
Q Consensus 230 ~~i~~~S~SK~~~~~G~RiG-~~v~ 253 (400)
T Consensus 346 ~i~vtQStHK~L--aafSQaS~IHv 368 (720)
T PRK13578 346 GIFVTQSVHKQQ--AGFSQTSQIHK 368 (720)
T ss_pred CEEEEEEHHHHH--HHHCHHHEEEE
T ss_conf 504663065554--43222210122