HHsearch alignment for GI: 254780602 and conserved domain: TIGR01140

>TIGR01140 CobD L-threonine-O-3-phosphate decarboxylase, putative; InterPro: IPR005860 L-threonine-O-3-phosphate decarboxylase (CobD) was shown to decarboxylate L-threonine O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, which is the precursor for the linkage between the nucleotide loop and the corrin ring in the biosynthesis of cobalamin . The molecule is a dimer where each subunit consists of a large and small domain . This family contains pyridoxal phosphate-binding class II aminotransferases closely related to histidinol-phosphate aminotransferase (HisC). ; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=100.00  E-value=7e-45  Score=293.28  Aligned_cols=332  Identities=23%  Similarity=0.334  Sum_probs=275.4

Q ss_pred             CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             97266565897498899999999999838875699877898999999998642101333322332334543333222222
Q gi|254780602|r   31 IDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMA  110 (400)
Q Consensus        31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~  110 (400)
T Consensus         5 ~~lLDFsAninPlgpP~S~~aa~~~aLd~-~~rYPD~d-Y~hlrqA~AdH~------q~~~dwvl~gnG~~e~i~la~~t   76 (349)
T TIGR01140         5 DDLLDFSANINPLGPPASVKAALAAALDA-LERYPDDD-YIHLRQALADHH------QVAADWVLAGNGELESIRLAAET   76 (349)
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHCCCCCC-HHHHHHHHHHHH------CCCCCCEECCCCCHHHHHHHHHH
T ss_conf             43032434578888760204589874278-76088843-189999986541------25601254599727888998861


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCHHH----HHHCCCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf             233223222233332322222222222222--222222232221033----31000122122012113542100001233
Q gi|254780602|r  111 TVNMGDEVLIPRPYWVSYPDMVALCGGIPV--FVDTQQDDNFQVSPE----KLEQAITPKTKWLFLNSPSNPSGVVYSQN  184 (400)
Q Consensus       111 ~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~--~v~~~~~~~~~~d~~----~l~~~i~~~~k~i~l~nP~NPTG~v~s~~  184 (400)
T Consensus        77 ~~~~Gd~~~V~~P~F~eYgR~~~~~Gae~~ti~w~~~~~~~W~~~~dPseiA~l~A~~s~h~~lilctPnNPtG~l~~r~  156 (349)
T TIGR01140        77 LVSRGDAVLVVAPAFAEYGRELELAGAELKTIRWSLDEADGWRVLRDPSEIALLDAVTSEHDLLILCTPNNPTGDLLERD  156 (349)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCH
T ss_conf             47888757870887026799998569812234577316888745576456654126883313531117676989862247


Q ss_pred             CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH-HHHHHHH
Q ss_conf             332111223333320111012211000001223322211123332257414654432234454442211012-2687531
Q gi|254780602|r  185 RLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALS-LIKSMIV  263 (400)
Q Consensus       185 ~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~-li~~l~~  263 (400)
T Consensus       157 ~l~A~a~rc-~~~N~~LllDEAF~dF~pPG~E-~~l~p~l~~-~P~~~vlRSLTKfy~lPGLRlGylva~~Da~la~~r~  233 (349)
T TIGR01140       157 ALRALADRC-KAVNIELLLDEAFLDFLPPGEE-TSLVPSLKD-TPNVVVLRSLTKFYALPGLRLGYLVAVDDALLARLRA  233 (349)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHCCCCCCCC-CCCCCHHHC-CCCEEEECCHHHHHCCHHHHHHHHHCCCHHHHHHHHH
T ss_conf             899999888-8740466665565157898644-343413326-8978997111554025024454555166178999997


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf             00122233222222222222346764322222211000000024553047760330274089986264102332113322
Q gi|254780602|r  264 LQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDV  343 (400)
Q Consensus       264 ~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~  343 (400)
T Consensus       234 ~r~--pW~vnalAaaag~~al~-~sef~q~tw~wl~~erar~~qaL~~lP~l~v~Ps~anf-LLl~~~------------  297 (349)
T TIGR01140       234 ARR--PWSVNALAAAAGAAALR-DSEFRQETWRWLAEERARLRQALADLPLLDVYPSRANF-LLLKVE------------  297 (349)
T ss_pred             HCC--CCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-EEEECC------------
T ss_conf             428--99877689999999876-67899999874366778999999717887558888761-145458------------


Q ss_pred             CCCHHHHHHHHHHHCCEEEECCCCCC-C-CCEEEEEEECCH--HHHHHHHH
Q ss_conf             48989999999987397998350228-9-972899962999--99999999
Q gi|254780602|r  344 IRTDLDFVNGLLEIEKVAVVQGSSFG-H-GPSIRISYAVSD--AILEEACV  390 (400)
Q Consensus       344 ~~~~~~~~~~Ll~~~gV~v~pG~~Fg-~-~~~iRis~~~~~--e~l~~al~  390 (400)
T Consensus       298 -~~~~dl~~~llt~~~IliRdc~~fpgLds~~~RVAvRt~a~N~rLlaALa  347 (349)
T TIGR01140       298 -REDVDLQEELLTKERILIRDCLSFPGLDSDYYRVAVRTAAENDRLLAALA  347 (349)
T ss_pred             -CCCHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHH
T ss_conf             -98688999998743410012057888887527888528554789999961