HHsearch alignment for GI: 254780602 and conserved domain: TIGR02104
>TIGR02104 pulA_typeI pullulanase, type I; InterPro: IPR011840 Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the entries in IPR011838 from INTERPRO and IPR011839 from INTERPRO but having a different domain architecture with shorter sequences. Members are called type I pullulanases ..
Probab=93.51 E-value=0.029 Score=33.87 Aligned_cols=142 Identities=18% Similarity=0.225 Sum_probs=74.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCC-CCC-------------CCCCCCCHHHHHHCC
Q ss_conf 33454333322222223322322223333-232222222222222222-222-------------223222103331000
Q gi|254780602|r 96 VGTGAKHVIFNALMATVNMGDEVLIPRPY-WVSYPDMVALCGGIPVFV-DTQ-------------QDDNFQVSPEKLEQA 160 (400)
Q Consensus 96 it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~-y~~y~~~~~~~g~~~~~v-~~~-------------~~~~~~~d~~~l~~~ 160 (400)
T Consensus 158 ~~SGv~~~~KGkYLGL~E~gT----~~~~G~~TGl~y~keLGVTHVqLLP~fDf~~~de~~~~Fe~~YNWGYDP~nyn-- 231 (655)
T TIGR02104 158 PNSGVKNELKGKYLGLTETGT----KGPNGVSTGLDYLKELGVTHVQLLPVFDFASVDEEDPNFENAYNWGYDPLNYN-- 231 (655)
T ss_pred CCCCEECCCCCCCHHHCCCCC----CCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--
T ss_conf 788722166633210101586----68888510435554336535654341122410266778732277664766553--
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
T Consensus 232 ---vPEGSYsTdP~~P~~RI---~ELKqmi~~l-H~~GirVImDVVYNH~y-~~G~~S~Fek~VPgYyyR~~~~G~~~-- 301 (655)
T TIGR02104 232 ---VPEGSYSTDPYDPATRI---LELKQMIQAL-HENGIRVIMDVVYNHTY-SRGEESPFEKTVPGYYYRYNEDGTFS-- 301 (655)
T ss_pred ---CCCCCCCCCCCCCCCHH---HHHHHHHHHH-HHCCCEEEEEECCCCCC-CCCCCCCHHHCCCCHHEEECCCCCCC--
T ss_conf ---77754367888773076---7888999999-86688799850247603-34675850003872111147888824--
Q ss_pred CCCCCCCCCCCCCHHH
Q ss_conf 2234454442211012
Q gi|254780602|r 241 YAMTGLRIGYAAGALS 256 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~ 256 (400)
T Consensus 302 -NGtG--vGNdtASEr 314 (655)
T TIGR02104 302 -NGTG--VGNDTASER 314 (655)
T ss_pred -CCCC--CCCCCCCCC
T ss_conf -7643--547600002