>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

Probab=99.42 E-value=7.1e-15 Score=110.66 Aligned_cols=168 Identities=20% Similarity=0.332 Sum_probs=114.3 Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 98999999998642101333322332334543333222222233223222233332322222222222222222222232 Q gi|254780602|r 70 ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDN 149 (400) Q Consensus 70 ~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~ 149 (400) T Consensus 61 I~eAq~laA~~~----ga---~~s~flvnGsT~g~~a~i~a~~~~gd~vlv~RN~HkSv~~gl~l~g~~Pvyl~p~~~~~ 133 (294) T cd00615 61 IKEAQELAARAF----GA---KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPY 133 (294) T ss_pred HHHHHHHHHHHH----CC---CCEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCC T ss_conf 999999999983----99---96699827726999999998328999899826518999999998698489960643555 Q ss_pred ----CCCHHHHHHCCCC--CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CCCCCCCCCCCCCC Q ss_conf ----2210333100012--2122012113542100001233332111223333320111012211-00000122332221 Q gi|254780602|r 150 ----FQVSPEKLEQAIT--PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYE-HIVYRNCQFSNIVN 222 (400) Q Consensus 150 ----~~~d~~~l~~~i~--~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~-~l~~~~~~~~s~~~ 222 (400) T Consensus 134 ~gi~~~i~~~~~~~al~~~p~~kav~lt~Pt-Y~G~~~D---l~~i~~~~-h~~~~~llVDEAhGah~~F~~~lp~~a~~ 208 (294) T cd00615 134 YGIAGGIPPETFKKALIEHPDAKAAVITNPT-YYGICYN---LRKIVEEA-HHRGLPVLVDEAHGAHFRFHPILPSSAAM 208 (294) T ss_pred CCCCCCCCHHHHHHHHHHCCCCCEEEEECCC-CCEEEEC---HHHHHHHH-HHCCCEEEEECCCHHHHHCCCCCCCCHHH T ss_conf 6953899999999999858996589997799-8877668---99999998-40499799977540344318778755666 Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCC-CCCCHHH Q ss_conf 112333225741465443223445444-2211012 Q gi|254780602|r 223 VEPSLYERTLVVNGVSKAYAMTGLRIG-YAAGALS 256 (400) Q Consensus 223 ~~~~~~~~~i~~~S~SK~~~~~G~RiG-~~v~~~~ 256 (400) T Consensus 209 ~--G---AD~vv~S~HKtL--~altQ~s~lh~~~~ 236 (294) T cd00615 209 A--G---ADIVVQSTHKTL--PALTQGSMIHVKGD 236 (294) T ss_pred C--C---CEEEEECHHHCC--CCCCHHHHEEECCC T ss_conf 6--9---639996232145--33222532023799

HHsearch alignment for GI: 254780602 and conserved domain: cd00615