HHsearch alignment for GI: 254780602 and conserved domain: pfam05889

>pfam05889 SLA_LP_auto_ag Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). This family consists of several eukaryotic and archaeal proteins which are related to the human soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway. Some archaeal members are annotated as being pyridoxal phosphate-dependent enzymes.
Probab=96.83  E-value=0.0004  Score=45.15  Aligned_cols=301  Identities=16%  Similarity=0.151  Sum_probs=141.9

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCCCC--CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9999999864210133332233233454333322-222223--32232-2223333232222222222222222222223
Q gi|254780602|r   73 LREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFN-ALMATV--NMGDE-VLIPRPYWVSYPDMVALCGGIPVFVDTQQDD  148 (400)
Q Consensus        73 lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~-~~~~~~--~~Gd~-Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~  148 (400)
T Consensus        57 LTn~l~~d~lr~~G~~-s~~~~~vvP~aTG-Msl~~~L~~~~~rp~a~yViw~RiDqKSc~Kai~~AGl~p~vVe~~~~~  134 (389)
T pfam05889        57 LTNELVKDFLKLLGLR-EVKNCFVVPLATG-MSLLCMLSWRRKRPKAKYVIWPRIDQKSSIKAAERAGFEPRLVETVLDG  134 (389)
T ss_pred             HHHHHHHHHHHHCCCC-CCCCEEEECCCCC-HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEEEEECC
T ss_conf             9999999999982974-3165789504104-7999999998558899789986355522689999769714887525228


Q ss_pred             C-CCCHHHHHHCCCCCC-CC--CEEECCCCCCCCCCCC---CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             2-221033310001221-22--0121135421000012---333321112233333201110122110000012233222
Q gi|254780602|r  149 N-FQVSPEKLEQAITPK-TK--WLFLNSPSNPSGVVYS---QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIV  221 (400)
Q Consensus       149 ~-~~~d~~~l~~~i~~~-~k--~i~l~nP~NPTG~v~s---~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~  221 (400)
T Consensus       135 d~l~Td~~~ie~~i~~~g~~~ilcVlsT-----TScFaPR~pD~v~~IAklC~-~~~IpHvVNnAYGlQ~---~~~~~~i  205 (389)
T pfam05889       135 DYLITDVNDVETIIEEKGEEVILAVLST-----TSCFAPRSPDNVKEIAKICA-EYDVPHLVNGAYGIQS---EETIRLI  205 (389)
T ss_pred             CEEECCHHHHHHHHHHHCCCCEEEEEEC-----CCCCCCCCCCCHHHHHHHHH-HCCCCEEECCHHHHHH---HHHHHHH
T ss_conf             8243589999999998387766899844-----66569999667999999999-7499747843036617---9999999


Q ss_pred             CCCCCCCCEEEEECCCCCCCCCCCCCCC-CCCC--HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             1112333225741465443223445444-2211--012268753100122233222222222222346764322222211
Q gi|254780602|r  222 NVEPSLYERTLVVNGVSKAYAMTGLRIG-YAAG--ALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIF  298 (400)
Q Consensus       222 ~~~~~~~~~~i~~~S~SK~~~~~G~RiG-~~v~--~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~  298 (400)
T Consensus       206 ~~a~r~GRVDa~VQStDKNflVP---VGGaIIas~d~~~i~~is~~YPGRAS~--sp~lDlfITLLslG~~gy~~Ll~eR  280 (389)
T pfam05889       206 AAAHECGRVDAVVQSLDKNFIVP---VGGAIIAAFDESFIQEISEEYPGRASA--RPSKDKLITLLSLGCKAYLALMKEQ  280 (389)
T ss_pred             HHHHHCCCCEEEEEECCCCEEEE---CCCEEEEECCHHHHHHHHHCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99986388218997068662553---487489708889999998418997777--4079999999997488899999999


Q ss_pred             CCCCCCHHHHHHCC---CCCEEEE-CCC--CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH--CCEEEEC-CCCCC
Q ss_conf             00000002455304---7760330-274--08998626410233211332248989999999987--3979983-50228
Q gi|254780602|r  299 EYRRDLCVAQLQGV---PGIRYMI-PDG--AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEI--EKVAVVQ-GSSFG  369 (400)
Q Consensus       299 ~~~r~~~~~~L~~~---~g~~~~~-p~g--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~--~gV~v~p-G~~Fg  369 (400)
T Consensus       281 ke~~~~l~e~L~~~a~~~ge~lL~t~~N~IS~ai--tl~~l~~------~~~~~~t~lgs~Lf~r~VsG~RvV~~~~~~~  352 (389)
T pfam05889       281 KEMFPLLRELLKDLAEEVGEQLLDVPHNPISSAM--TLETLDE------ISKKGRTDLGSELFSRRVTGARVVRSSDPFG  352 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEE--ECCCCCC------CCCCCHHHHHHHHHHCCCCCCEEECCCCCCC
T ss_conf             9999999999999999829875138999516888--7345566------6755499999999756787651665688853


Q ss_pred             -------CCCEEEE--EEECCHHHHHHHHHHHHHHHH
Q ss_conf             -------9972899--962999999999999999998
Q gi|254780602|r  370 -------HGPSIRI--SYAVSDAILEEACVRIKRFCH  397 (400)
Q Consensus       370 -------~~~~iRi--s~~~~~e~l~~al~rl~~~l~  397 (400)
T Consensus       353 ~~~~~~y~~~Ylt~aaaiG~~~~dVd~f~~rL~k~l~  389 (389)
T pfam05889       353 TIEGCEYHGRYLNIASAIGMKDEDVDYVIERLDEILE  389 (389)
T ss_pred             EEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf             4616768836789998708868999999999998529