HHsearch alignment for GI: 254780603 and conserved domain: pfam04013
>pfam04013 DUF358 Protein of unknown function (DUF358). The proteins in this family are around 200 amino acids long with the exception of the Archaeoglobus fulgidus protein AF_1056 that has an additional 100 amino acids at its amino terminus. The function of these bacterial protein is unknown, however, they do contain several conserved histidines and aspartates that might form a metal binding site.
Probab=90.34 E-value=0.3 Score=26.55 Aligned_cols=118 Identities=14% Similarity=0.145 Sum_probs=73.6
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
Q ss_conf 06889999999864200110013686320000013444333321101222322112222222100000001233322112
Q gi|254780603|r 143 DPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQTIGLSSDSKKPLEQ 222 (282)
Q Consensus 143 dp~NlG~I~Rta~a~g~~~vil~~~~~~~~~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~ 222 (282)
T Consensus 79 dERsiA~~I~kal~~~~~----~~~~~-------~e~~pGI-----~v~~~~fe~ll~e~~e-~~~~~~Ld~~G~-~i~~ 140 (199)
T pfam04013 79 DERSIAILIKKALRAVKE----SGKQW-------RKVLPGI-----YVSRMGFEALIRELSE-FKPLYYLHEDGG-DISN 140 (199)
T ss_pred HHHHHHHHHHHHHCCCCC----CCCCE-------EEECCCE-----EEECCCHHHHHHHHHC-CCCEEEECCCCC-CCCC
T ss_conf 388999999999716788----88743-------7846998-----9949899999999855-897999978898-4323
Q ss_pred CCCC-CCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 2368-98899975867898779998589399927896874378999999999999876
Q gi|254780603|r 223 EIKN-DKIALILGAEGKGLRPKTQETATSMAHLHMPGIIKALNVSNAAAVALYITQNH 279 (282)
Q Consensus 223 ~~~~-~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~SLNvs~a~ai~l~~~~~~ 279 (282)
T Consensus 141 ~~~~~~~~~FiL~Dh-~~~~~~e~~~L~~~~~~~iSLGp~~L~a~hcI~ivH~~LD~~ 197 (199)
T pfam04013 141 VKIPPNNPVFILGDH-IGLPEEDEKFLERILALKVSLGPLSLHASHCITLVHNHLDRL 197 (199)
T ss_pred CCCCCCCCEEEECCC-CCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 557788976985599-998867888886448821553738888757999999987316