HHsearch alignment of GI: 254780603 and MMDB domain: 1v2x_A_21-176
>1v2x_A (A:21-176) TRNA (GM18) methyltransferase; DEEP trefoil knot, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: SAM; 1.50A {Thermus thermophilus}
Probab=100.00 E-value=3.4e-41 Score=255.06 Aligned_cols=148 Identities=23% Similarity=0.324 Sum_probs=139.2
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 50688723432068899999998642001100136863200000134443333211012223221122222221000000
Q gi|254780603|r 132 SQLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQTIG 211 (282)
Q Consensus 132 ~~~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~~~~~i~~ 211 (282)
|+++++||+++||+|+|+|+|||++||++++++.+.++++++. .|+|+|+.+++++..+.+..+++..+++.|+++++
T Consensus 1 p~l~ivl~~~~~~~NiG~i~Rta~a~G~~~i~i~~~~~~~~~~--~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (156)
T 1v2x_A 1 PDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTF--NETSGGSHKWVYLRVHPDLHEAFRFLKERGFTVYA 78 (156)
T ss_dssp TTEEEEEESCCCHHHHHHHHHHHHHHTBSEEEEESGGGGSCCC--CSSCSSGGGTSEEEEESSHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCEE--EEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCCC
T ss_conf 9979999679886639999999998198612023442343000--01001221443011245422368999865885311
Q ss_pred CCCC-CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 0123-332211223689889997586789877999858939992789687437899999999999987614
Q gi|254780603|r 212 LSSD-SKKPLEQEIKNDKIALILGAEGKGLRPKTQETATSMAHLHMPGIIKALNVSNAAAVALYITQNHFA 281 (282)
Q Consensus 212 ~~~~-~~~~~~~~~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~SLNvs~a~ai~l~~~~~~~~ 281 (282)
++.. +..++++.+++++.+||||+|++|||+++++.||.+++|||.+.++|||||+|+||+|||+.||+.
T Consensus 79 ~~~~~~~~~l~~~~~~~~~~lv~G~E~~Gls~e~l~~~d~~v~IP~~g~~~SLNvs~A~~I~lye~~r~~~ 149 (156)
T 1v2x_A 79 TALREDARDFREVDYTKPTAVLFGAEKWGVSEEALALADGAIKIPMLGMVQSLNVSVAAAVILFEAQRQRL 149 (156)
T ss_dssp ECCCTTSEEGGGSCTTSSEEEEECBTTTBSCHHHHHHSSEEEECCCCSSCSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 22222332210125788808996676664668999724928995899986633299999999999999998