HHsearch alignment of GI: 254780603 and MMDB domain: 1x7o_A_119-287
>1x7o_A (A:119-287) Avirb, rRNA methyltransferase; SPOU, C-terminal knot, seMet; 2.37A {Streptomyces viridochromogenes} PDB: 1x7p_A*
Probab=100.00 E-value=2.1e-42 Score=261.95 Aligned_cols=152 Identities=21% Similarity=0.269 Sum_probs=141.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 66506887234320688999999986420011001368632000001344433332110122232211222222210000
Q gi|254780603|r 130 RNSQLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQT 209 (282)
Q Consensus 130 ~~~~~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~~~~~i 209 (282)
+..+++++||+++||+|+|+|+|||++||++.+++.+.++++++++++|+|+|+++++|+..+.++.+++..+++.++..
T Consensus 5 ~~~~~~vvl~~~~~p~NiGai~Rta~afG~~~i~~~~~~~~~~~~~~~r~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (169)
T 1x7o_A 5 REDFLGVLFDRPTSPGNIGSIIRSADALGAHGLIVAGHAADVYDPKSVRSSTGSLFSLPAVRVPSPGEVXDWVEARRAAG 84 (169)
T ss_dssp CTTCEEEEEESCSCHHHHHHHHHHHHHTTCCEEEEESSSSCTTSHHHHHHTTTGGGTSCEEEESSHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHCC
T ss_conf 66728999834121665998877887354676986313333331002102200211101223341100000001344337
Q ss_pred HH-----CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 00-----0123332211223689889997586789877999858939992789687437899999999999987614
Q gi|254780603|r 210 IG-----LSSDSKKPLEQEIKNDKIALILGAEGKGLRPKTQETATSMAHLHMPGIIKALNVSNAAAVALYITQNHFA 281 (282)
Q Consensus 210 ~~-----~~~~~~~~~~~~~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~SLNvs~a~ai~l~~~~~~~~ 281 (282)
.+ +...+..++++..++++++||||+|+.||++++++.||++|+|||.+.++|||||+|++|+|||+.||+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvfG~E~~Gl~~~~l~~~d~~v~IP~~g~~~SLNvs~A~aI~lye~~rq~~ 161 (169)
T 1x7o_A 85 TPIVLVGTDEHGDCDVFDFDFTQPTLLLIGNETAGLSNAWRTLCDYTVSIPXAGSASSLNAANAATAILYEAVRQRI 161 (169)
T ss_dssp CCCEEEEECTTCSEEGGGSCTTSCEEEEECBTTTBSCHHHHHHCSEEEECCCSSSSCCCCHHHHHHHHHHHHHHHHS
T ss_pred CCEEEECCHHCCCCCCHHHHCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHH
T ss_conf 75687411000343211120268619998888878899999858989998899999713199999999999998786