HHsearch alignment of GI: 254780603 and MMDB domain: 2qmm_A_
>2qmm_A (A:) UPF0217 protein AF_1056; alpha/beta knot, SAM, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.85A {Archaeoglobus fulgidus dsm 4304}
Probab=90.03 E-value=0.087 Score=29.28 Aligned_cols=113 Identities=17% Similarity=0.264 Sum_probs=73.4
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 20688999999986420011001368632000001344433332110122232211222222210000000123332211
Q gi|254780603|r 142 NDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQTIGLSSDSKKPLE 221 (282)
Q Consensus 142 ~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~ 221 (282)
-|-.++++.+|.|..-+...-+. +++.|- +++-..+.+.++.+. .++++|-++.+|. ++.
T Consensus 79 pdErs~a~~I~kAL~~~~~~~~~-------------e~~pGi-----~v~~~~fe~ll~~l~-~~~~l~~L~e~G~-~i~ 138 (197)
T 2qmm_A 79 PDERNVAGHIKKALAVECGKSWK-------------KVHSGV-----YVSRKGLEELIEELS-EKYSIIYLKEDGV-DIS 138 (197)
T ss_dssp SSHHHHHHHHHHHHHSCCCSSCE-------------EEETTE-----EEECCCHHHHHHHHH-HHSEEEEEEEEEE-EGG
T ss_pred CCHHHHHHHHHHHHCCCCCCCCE-------------EECCCE-----EEECCCHHHHHHHHH-CCCCEEEECCCCC-CCC
T ss_conf 11788999999984678888723-------------544898-----991888999999986-5796899878898-623
Q ss_pred CCCCCCCEEEEECCCCCCCCHHHHHHC----CCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 223689889997586789877999858----9399927896874378999999999999876
Q gi|254780603|r 222 QEIKNDKIALILGAEGKGLRPKTQETA----TSMAHLHMPGIIKALNVSNAAAVALYITQNH 279 (282)
Q Consensus 222 ~~~~~~~~~lv~G~E~~Gl~~~~~~~~----d~~v~Ip~~~~~~SLNvs~a~ai~l~~~~~~ 279 (282)
+..++++-++|+|.- .|++++-.+.. +..|++- -.+|=.+++.+++-+++.|.
T Consensus 139 ~~~~~~~p~FvLgDH-~~~~~ee~~~L~~~~a~~iSlG----p~~l~A~hcI~~vhn~LDr~ 195 (197)
T 2qmm_A 139 NAQLPPNPLFVIGDH-EGLTEEQEKVVERYAALKLSLS----PLSLLAEQCVVIAHHHLDRL 195 (197)
T ss_dssp GSCCCSSEEEEEECT-TCCCHHHHHHHHTTCSEEEECC----SSCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECC-CCCCHHHHHHHHHCCCCEEECC----CCCCCHHHHHHHHHHHHHHC
T ss_conf 334689986997189-9988678887764277115625----42135236696999988651