HHsearch alignment of GI: 254780603 and MMDB domain: 3e5y_A_
>3e5y_A (A:) TRMH family RNA methyltransferase; ssgcid, protein knot, decode, structural genomics; 2.40A {Burkholderia pseudomallei 305}
Probab=100.00 E-value=8.7e-43 Score=264.18 Aligned_cols=151 Identities=16% Similarity=0.137 Sum_probs=146.8
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 65068872343206889999999864200110013686320000013444333321101222322112222222100000
Q gi|254780603|r 131 NSQLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQTI 210 (282)
Q Consensus 131 ~~~~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~~~~~i~ 210 (282)
+++++++||+|+||+|+|+|+|||++||+++|++.+++++++++++.|+|+|+++++|+..+.++.+++..+++.+++++
T Consensus 3 ~~~~~vvl~~i~~~~NiG~i~Rta~afG~~~i~~~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 82 (160)
T 3e5y_A 3 GSMFNVVLVEPEIPPNTGNVIRLCANTGARLHLIEPLGFPLDDAKMRRAGLDYHEYAQMRVHRDWDAFVAAEAPDPARMF 82 (160)
T ss_dssp --CCEEEEESCCCHHHHHHHHHHHHHHTCEEEEESSCSSCCCHHHHHHTTCCHHHHHTCEEESSHHHHHHHHCCCGGGEE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHCCCHHHHHHHHHCCCEEEE
T ss_conf 77569999479988859999999998499678606997674523344445742322111102427776654203540699
Q ss_pred HCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCC--EEEECCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 0012333221122368988999758678987799985893--9992789687437899999999999987614
Q gi|254780603|r 211 GLSSDSKKPLEQEIKNDKIALILGAEGKGLRPKTQETATS--MAHLHMPGIIKALNVSNAAAVALYITQNHFA 281 (282)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gl~~~~~~~~d~--~v~Ip~~~~~~SLNvs~a~ai~l~~~~~~~~ 281 (282)
.++..+..++.++.++++.+||||+|+.|||+++++.||. .++|||.+.++|||||+|+||+|||..||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gl~~e~l~~cd~~~~v~IP~~~~~~SLNvsvA~aI~l~e~~rq~~ 155 (160)
T 3e5y_A 83 AFTTRGSGRFHDRAFEPGDWFVFGAETRGLAPALVDRFAPEQRVRLPMRPGNRSLNLSNTVAVVVFEAWRQAG 155 (160)
T ss_dssp EECSTTCEEGGGSCCCTTCEEEEEBTTTBSCHHHHTTSCGGGEEECCCCSSSCCCCHHHHHHHHHHHHHHHTT
T ss_pred EEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEECCCCCCCCEEEHHHHHHHHHHHHHHCCC
T ss_conf 8402344322123456411899716555489999986236763602799998637799999999999998028