HHsearch alignment of GI: 254780603 and MMDB domain: 3ic6_A_1-201
>3ic6_A (A:1-201) Putative methylase family protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.59A {Neisseria gonorrhoeae fa 1090}
Probab=100.00 E-value=2.7e-42 Score=261.40 Aligned_cols=152 Identities=17% Similarity=0.154 Sum_probs=138.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC-------------------CCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 66506887234320688999999986420011001-------------------36863200000134443333211012
Q gi|254780603|r 130 RNSQLLMVLDHVNDPHNIGAILRSAVAFSCDGIIT-------------------TKRYSPSESAVLAKSASGALEHIPYI 190 (282)
Q Consensus 130 ~~~~~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil-------------------~~~~~~~~~~~~~ras~Ga~~~l~~~ 190 (282)
..++++++||+++||+|+|+|+|||++||+++|++ ++.+.++++++++|+|+|+.+++|+.
T Consensus 14 ~~~~~~ivld~v~~p~NiG~i~Rsa~afGv~~i~lv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~ga~~~~~~~ 93 (201)
T 3ic6_A 14 YLGNIRIILTRTSHPANIGSAARAXKTXGLHRLTIVTPNLXATPXTENPPVFNPDDVQSFALPEESFILASGAADVLHNA 93 (201)
T ss_dssp GGGGEEEEEESCCCHHHHHHHHHHHHHTTCCCEEEESCCCCCBTTBSSCCCCCTTCGGGCCCCHHHHHHHGGGHHHHHTC
T ss_pred HHCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
T ss_conf 20582899937988871999999999859986999788778753465543104532124556689999946769887665
Q ss_pred CCCCCCCCCCCCCCCCCHHHHCC-----------CCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCC
Q ss_conf 22322112222222100000001-----------2333221122368988999758678987799985893999278968
Q gi|254780603|r 191 RISNLTDALQKMHSWGFQTIGLS-----------SDSKKPLEQEIKNDKIALILGAEGKGLRPKTQETATSMAHLHMPGI 259 (282)
Q Consensus 191 ~~~~~~~~l~~~~~~~~~i~~~~-----------~~~~~~~~~~~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~ 259 (282)
++.+..+++..++..++.+++.. ..+..++++.+++++++||||||++|||+++++.||++|+|||.|.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvlG~E~~Gls~~~l~~~d~~v~IP~~g~ 173 (201)
T 3ic6_A 94 EIVATLDEALADTTIACALTSRRREITAPLQTPRDLVPELLQAANRGEKVALVFGNETFGLSIEEVRACNRLXTINGNPD 173 (201)
T ss_dssp EEESCHHHHHTTEEEEEEECCSCC--CCCCBCHHHHHHHHHHHHHTTCEEEEEECBTTTBCCHHHHHTCSEEECCCCCTT
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHEECCCCCC
T ss_conf 40123999997512210222210024333225210010122210478734787676557721689986422240467899
Q ss_pred CCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 7437899999999999987614
Q gi|254780603|r 260 IKALNVSNAAAVALYITQNHFA 281 (282)
Q Consensus 260 ~~SLNvs~a~ai~l~~~~~~~~ 281 (282)
++|||||+|+||+|||+.||+.
T Consensus 174 ~~SLNvs~A~aI~l~e~~rq~~ 195 (201)
T 3ic6_A 174 YFSLNLAQAVQVVCYEIFSQTD 195 (201)
T ss_dssp CCCCCHHHHHHHHHHHHHHTTT
T ss_pred CCCEEHHHHHHHHHHHHHHHHC
T ss_conf 8867099999999999999616