HHsearch results for GI: 254780603 and protein with PDBid: 2yy8_A

>2yy8_A ATRM56, UPF0106 protein PH0461; DEEP trefoil knot, structural genomics, NPPSFA; HET: SAM MTA; 2.48A {Pyrococcus horikoshii}
Probab=96.88  E-value=0.0032  Score=36.65  Aligned_cols=123  Identities=20%  Similarity=0.151  Sum_probs=79.1

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC---HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
Q ss_conf             2068899999998642001100136863200---0001344433332110122232211222222210000000123332
Q gi|254780603|r  142 NDPHNIGAILRSAVAFSCDGIITTKRYSPSE---SAVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQTIGLSSDSKK  218 (282)
Q Consensus       142 ~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~---~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~  218 (282)
                      +|+.=.--+.=||-|||+++++++... |+-   +-.-+-..=|.-|.+.+  ..++..+   +++.+-.++.+++-|. 
T Consensus        13 RDkRiTTHV~LtARAfGA~~i~l~~~~-D~~v~etv~~V~~rwGG~F~ve~--~~~~~~~---ik~~~G~vVHLTMYG~-   85 (201)
T 2yy8_A           13 RDKRVTTHVALTARAFGADGIIIASEE-DEKVKESVEDVVKRWGGPFFIEF--NRNWRKV---MKEFTGVKVHLTMYGL-   85 (201)
T ss_dssp             -CTHHHHHHHHHHHHTTCSEEEESSSC-CHHHHHHHHHHHHHHCSCCBCCB--CSCHHHH---HHHCCSEEEEEEEEEE-
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEECCCC-CCHHHHHHHHHHHHCCCCEEEEE--CCCHHHH---HHHCCCEEEEEECCCC-
T ss_conf             675225688899987168758974788-73699999999985299669997--4688999---9865997999844787-


Q ss_pred             CCC----C----CCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             211----2----2368988999758678987799985893999278968743789999999999998
Q gi|254780603|r  219 PLE----Q----EIKNDKIALILGAEGKGLRPKTQETATSMAHLHMPGIIKALNVSNAAAVALYITQ  277 (282)
Q Consensus       219 ~~~----~----~~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~SLNvs~a~ai~l~~~~  277 (282)
                      ++.    +    ..-.++..+|+|.|-  +|.++-+.||+.|.|--...-|    -.|.||+|-.+.
T Consensus        86 ~i~dvi~~Ir~~~~~~~~iLVVVGaeK--VP~evYelADyNVaVgNQPHSE----VAALAIFLDrl~  146 (201)
T 2yy8_A           86 HVDDVIEELKEKLKKGEDFMIIVGAEK--VPREVYELADYNVAIGNQPHSE----VAALAVLLDRLL  146 (201)
T ss_dssp             EHHHHHHHHHHHHHTTCCEEEEECSSC--CCHHHHHHCSEEEESSSSCCCH----HHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHCCCCCCEEEEECCCC--CCHHHHHHCCCCEEECCCCHHH----HHHHHHHHHHHH
T ss_conf             602677988752556885899978885--9989983367525547887289----999999999870