HHsearch results for GI: 254780603 and protein with PDBid: 2yy8_A
>2yy8_A ATRM56, UPF0106 protein PH0461; DEEP trefoil knot, structural genomics, NPPSFA; HET: SAM MTA; 2.48A {Pyrococcus horikoshii}
Probab=96.88 E-value=0.0032 Score=36.65 Aligned_cols=123 Identities=20% Similarity=0.151 Sum_probs=79.1
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC---HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
Q ss_conf 2068899999998642001100136863200---0001344433332110122232211222222210000000123332
Q gi|254780603|r 142 NDPHNIGAILRSAVAFSCDGIITTKRYSPSE---SAVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQTIGLSSDSKK 218 (282)
Q Consensus 142 ~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~---~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~ 218 (282)
+|+.=.--+.=||-|||+++++++... |+- +-.-+-..=|.-|.+.+ ..++..+ +++.+-.++.+++-|.
T Consensus 13 RDkRiTTHV~LtARAfGA~~i~l~~~~-D~~v~etv~~V~~rwGG~F~ve~--~~~~~~~---ik~~~G~vVHLTMYG~- 85 (201)
T 2yy8_A 13 RDKRVTTHVALTARAFGADGIIIASEE-DEKVKESVEDVVKRWGGPFFIEF--NRNWRKV---MKEFTGVKVHLTMYGL- 85 (201)
T ss_dssp -CTHHHHHHHHHHHHTTCSEEEESSSC-CHHHHHHHHHHHHHHCSCCBCCB--CSCHHHH---HHHCCSEEEEEEEEEE-
T ss_pred CCCCHHHHHHHHHHHHCCCEEEECCCC-CCHHHHHHHHHHHHCCCCEEEEE--CCCHHHH---HHHCCCEEEEEECCCC-
T ss_conf 675225688899987168758974788-73699999999985299669997--4688999---9865997999844787-
Q ss_pred CCC----C----CCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 211----2----2368988999758678987799985893999278968743789999999999998
Q gi|254780603|r 219 PLE----Q----EIKNDKIALILGAEGKGLRPKTQETATSMAHLHMPGIIKALNVSNAAAVALYITQ 277 (282)
Q Consensus 219 ~~~----~----~~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~SLNvs~a~ai~l~~~~ 277 (282)
++. + ..-.++..+|+|.|- +|.++-+.||+.|.|--...-| -.|.||+|-.+.
T Consensus 86 ~i~dvi~~Ir~~~~~~~~iLVVVGaeK--VP~evYelADyNVaVgNQPHSE----VAALAIFLDrl~ 146 (201)
T 2yy8_A 86 HVDDVIEELKEKLKKGEDFMIIVGAEK--VPREVYELADYNVAIGNQPHSE----VAALAVLLDRLL 146 (201)
T ss_dssp EHHHHHHHHHHHHHTTCCEEEEECSSC--CCHHHHHHCSEEEESSSSCCCH----HHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHCCCCCCEEEEECCCC--CCHHHHHHCCCCEEECCCCHHH----HHHHHHHHHHHH
T ss_conf 602677988752556885899978885--9989983367525547887289----999999999870