HHsearch results for GI: 254780603 and protein with PDBid: 3ilk_A
>3ilk_A Uncharacterized tRNA/RRNA methyltransferase HI0380; APC63004, methylase family protein, haemophilus influenzae RD KW20; 2.01A {Haemophilus influenzae}
Probab=100.00 E-value=1.7e-34 Score=215.75 Aligned_cols=143 Identities=18% Similarity=0.194 Sum_probs=113.8
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCHHH
Q ss_conf 5068872343206889999999864200110013686320000013444333321101222-322112222222100000
Q gi|254780603|r 132 SQLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYIRI-SNLTDALQKMHSWGFQTI 210 (282)
Q Consensus 132 ~~~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~~~~~~ras~Ga~~~l~~~~~-~~~~~~l~~~~~~~~~i~ 210 (282)
..+.|||+++|+|+|+|+|+|||++||++++++...+ +++++++++|+|+.+.++...+ .++.+++..+... +
T Consensus 6 ~~i~iVL~~p~~p~NiGai~Rs~~~fG~~~L~lV~p~--~~~~~a~~~a~ga~~~l~~~~~~~~~~~~~~~~~~~----~ 79 (244)
T 3ilk_A 6 ENIRIVLIETSHSGNIGSAARAMKTMGLTQLCLVSPK--SVDEQSYALSAGAENIVKNARVVDSFDEAVDDCSLV----I 79 (244)
T ss_dssp TTEEEEEESCCSHHHHHHHHHHHHHHTCCEEEEESCS--CCSHHHHHTTTTCHHHHHHCEEESSHHHHTTTCSEE----E
T ss_pred HCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCC--CCCHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHH----H
T ss_conf 3989999489886769999999998099979993899--989799997475411237579984066666667788----8
Q ss_pred HCCCC-----------CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 00123-----------3322112236898899975867898779998589399927896874378999999999999876
Q gi|254780603|r 211 GLSSD-----------SKKPLEQEIKNDKIALILGAEGKGLRPKTQETATSMAHLHMPGIIKALNVSNAAAVALYITQNH 279 (282)
Q Consensus 211 ~~~~~-----------~~~~~~~~~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~SLNvs~a~ai~l~~~~~~ 279 (282)
+++.. .+.......++++++||||+|+.||+.+.++.||..|+|||.+.++|||||+|++|+|||++++
T Consensus 80 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ialvfG~E~~GLs~~~l~~~d~~v~IP~~~~~~SLNls~AvaIvlYEl~~~ 159 (244)
T 3ilk_A 80 GTSARLRHLQNTLIEPRECAEKVVAYKGKIAIVFGRERIGLTNEELLKCHYHLNIPANPDYSSLNLAMAVQLVSYELRMA 159 (244)
T ss_dssp EECCCCGGGTTTEECHHHHHHHHHHCSSCEEEEECBTTTBCCHHHHHTCSEEECCCCCTTSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHH
T ss_conf 99876422564436878742232036886488616666899768761556069855899983232899999999999998
Q ss_pred H
Q ss_conf 1
Q gi|254780603|r 280 F 280 (282)
Q Consensus 280 ~ 280 (282)
.
T Consensus 160 ~ 160 (244)
T 3ilk_A 160 F 160 (244)
T ss_dssp H
T ss_pred H
T ss_conf 7