HHSEARCH alignment of GI: 254780603 and SCOP domain: d1gz0a2

Alignment
>d1gz0a2 d.79.3.3 (A:2-77) RlmB, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.07  E-value=1.5e-10  Score=77.28  Aligned_cols=71  Identities=21%  Similarity=0.269  Sum_probs=58.8

Q ss_pred             EEEEEHHHHHHHHHCCCEEEEEEEECCCCCCCC-CHHH--HHHCCCCEEEECHHHHHHHHCCCCCCCCCCEEEEC
Q ss_conf             999857889999978981899999737843354-3455--43269969997689987752477777744202411
Q gi|254780603|r   49 LFLYGVHTVSAALNNPSRKIFQLLATKNALARL-DWDA--NLPHPFPVKTVPPQTIDKIVGKEAVHQGLALETAP  120 (282)
Q Consensus        49 ~iIeG~~~V~eaL~~~~~~i~~i~~te~~~~~~-~~~~--~l~~~~~I~~v~~~~l~~i~~~~~~hqGi~a~~~~  120 (282)
                      .+|||.|+|.|||+++++.+..+|++++..++. ....  ...++++|..++++.|+++++. .+|||+++.+.|
T Consensus         2 e~IyG~haV~eaL~~~~r~i~~l~v~~~~~~~~~~~i~~~a~~~~i~i~~v~~~~Ld~l~~~-~~HQGVva~v~P   75 (76)
T d1gz0a2           2 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG-AVHQGIIARVKP   75 (76)
T ss_dssp             EEEESHHHHHHHHHSCGGGEEEEEEESSCCCTTTHHHHHHHHHHTCEEEEECSHHHHHTTTS-CCCTTEEEEECC
T ss_pred             CEEEEHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHCCC-CCCCEEEEEEEC
T ss_conf             68987499999986898764799996233658899999999976998799799999874599-999868999738


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: L30e-like
family: RNA 2'-O ribose methyltransferase substrate binding domain
domain: RlmB, N-terminal domain
species: Escherichia coli [TaxId: 562]