PSIBLAST alignment of GI: 254780603 and protein with PDB id: 1ipa

>gi|22218790|pdb|1IPA|A Chain A, Crystal Structure Of Rna 2'-O Ribose Methyltransferase Length = 274

 Score =  122 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 88/253 (34%), Gaps = 6/253 (2%)

Query: 27  HRDYKKMQSFNQKSRHTSQPENLFLYGVHTVSAALNNPSRKIFQLLATKNALARLDWDAN 86
           +   K++    ++ +H        + G   +  AL         L+              
Sbjct: 8   NPRIKELARLLER-KHRDSQRRFLIEGAREIERALQAGIELEQALVWEGGLNPEEQQVYA 66

Query: 87  LPHPFP---VKTVPPQTIDKIVGKEAVHQGLALETAPLLSPTLDAVRNSQLLMVLDHVND 143
                    +  V    + K+  ++     +AL   P  +          L++V   +  
Sbjct: 67  ALGRVGRLALLEVSEAVLKKLSVRDNPAGLIALARMPERTLEEYRPSPDALILVAVGLEK 126

Query: 144 PHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYIRISNLTDALQKMH 203
           P N+GA+LRSA A   + ++           V+    S  +        ++ ++ L  + 
Sbjct: 127 PGNLGAVLRSADAAGAEAVLVAGGVDLYSPQVIRN--STGVVFSLRTLAASESEVLDWIK 184

Query: 204 SWGFQTIGLSSDSKKPLEQEIKNDKIALILGAEGKGLRPKTQETATSMAHLHMPGIIKAL 263
                 +  +  ++    +      +A+ +G E +GLR    E A +   + M G   +L
Sbjct: 185 QHNLPLVATTPHAEALYWEANLRPPVAIAVGPEHEGLRAAWLEAAQTQVRIPMQGQADSL 244

Query: 264 NVSNAAAVALYIT 276
           NVS +AA+ LY  
Sbjct: 245 NVSVSAALLLYEA 257