PSIBLAST alignment of GI: 254780603 and protein with PDB id: 2i6d
>gi|118138229|pdb|2I6D|A Chain A, The Structure Of A Putative Rna Methyltransferase Of The Trmh Family From Porphyromonas Gingivalis Length = 257
Score = 95.3 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 90/258 (34%), Gaps = 17/258 (6%)
Query: 29 DYKKMQSFNQKSRHTSQPENLFLYGVHTVSAALNNPSRKIFQLLATKNALARLDWDANLP 88
K ++S ++ ++ + + + G V L P + L+ T L + P
Sbjct: 9 QIKFLRSLRER-KYRLREQAFAVEGPKLVGEXL--PFYRCRXLVGTAAXLR----AVSTP 61
Query: 89 HPFPVKTVPPQTIDKIVGKEAVHQGLALETAPLLSPTLDAVRNSQLLMVLDHVNDPHNIG 148
H V +P + + A P L ++LD V DP N+G
Sbjct: 62 HDAEVVELPES---FDFKRISTQTTPQPLXAVFDLPAEPEPVVEGLTLLLDGVQDPGNVG 118
Query: 149 AILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYIRISNLTDA--LQKMHSWG 206
ILR+A F + + S + +++ GAL + + N D +
Sbjct: 119 TILRTADWFGIRHVWLGTGSADVFSPKVVQASXGALARVQPTPLKNTVDTLAYFRRQGIP 178
Query: 207 FQTIGLSSDSKKPLEQEIKNDKIALILGAEGKGLRPKTQETATSMAHLHMP-----GIIK 261
L S + L+LG+EG+G+ P+ T + G +
Sbjct: 179 VYGAFLDGQSLYEAPLPNFTEPAILVLGSEGRGISPEVAAEITDRLTIPASGLSVKGHTE 238
Query: 262 ALNVSNAAAVALYITQNH 279
+LNV+ A A+ +
Sbjct: 239 SLNVAIATAILCSEWRRR 256