RPSBLAST alignment of GI: 254780603 and MMDB domain: 2ha8_A_

>2ha8_A (A:) TAR (HIV-1) RNA loop binding protein; methyltransferase, structural genomics, structural genomics consortium, SGC, RNA binding protein; HET: SAH; 1.60A {Homo sapiens}Length = 184

 Score =  100 bits (250), Expect = 2e-22
 Identities = 33/177 (18%), Positives = 70/177 (39%), Gaps = 6/177 (3%)

Query: 111 HQGLALETAPLLSPTLDAV--RNSQLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTK-R 167
            +   L+   L       +    S+L++V   ++ P N+G + R+   F    ++    +
Sbjct: 2   SRVSDLDLELLFQDRAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQ 61

Query: 168 YSPSESAVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQTIGLSSD-SKKPLEQEIKN 226
               +       ++     +  ++   L D LQ+  + G+  IG+        L Q    
Sbjct: 62  CISDKQFQHLSVSAEQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFP 121

Query: 227 DKIALILGAEGKGLRPKTQETATSMAHLHMPGIIKALNVSNAAAVALY--ITQNHFA 281
           +K  L+LG E +G+     +       +   GII++LNV  + A+ ++    Q   +
Sbjct: 122 EKSLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLS 178