RPSBLAST alignment of GI: 254780603 and protein with PDBid: 2i6d

>2i6d_A RNA methyltransferase, TRMH family; stuctural genomics, knot, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.85A {Porphyromonas gingivalis W83} Length = 257

 Score = 77.0 bits (188), Expect = 4e-15
 Identities = 52/252 (20%), Positives = 90/252 (35%), Gaps = 19/252 (7%)

Query: 31  KKMQSFNQKSRHTSQPENLFL-YGVHTVSAALNNPSRKIFQLLATKNALARLDWDANLPH 89
           K ++S  ++       E  F   G   V   L     +   L+ T   L  +    +   
Sbjct: 11  KFLRSLRERKYRLR--EQAFAVEGPKLVGEMLP--FYRCRMLVGTAAMLRAVSTPHDAEV 66

Query: 90  PFPVKTVPPQTIDKIVGKEAVHQGLALETAPLLSPTLDAVRNSQLLMVLDHVNDPHNIGA 149
              V+        +I  +      +A+       P         L ++LD V DP N+G 
Sbjct: 67  ---VELPESFDFKRISTQTTPQPLMAVFD----LPAEPEPVVEGLTLLLDGVQDPGNVGT 119

Query: 150 ILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQT 209
           ILR+A  F    +      +   S  + +++ GAL  +    + N  D L      G   
Sbjct: 120 ILRTADWFGIRHVWLGTGSADVFSPKVVQASMGALARVQPTPLKNTVDTLAYFRRQGIPV 179

Query: 210 IGLSSDSKK--PLEQEIKNDKIALILGAEGKGLRPKTQETATS-----MAHLHMPGIIKA 262
            G   D +           +   L+LG+EG+G+ P+     T       + L + G  ++
Sbjct: 180 YGAFLDGQSLYEAPLPNFTEPAILVLGSEGRGISPEVAAEITDRLTIPASGLSVKGHTES 239

Query: 263 LNVSNAAAVALY 274
           LNV+ A A+   
Sbjct: 240 LNVAIATAILCS 251