HHsearch alignment for GI: 254780604 and conserved domain: COG1103
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only].
Probab=99.86 E-value=3.3e-19 Score=143.49 Aligned_cols=319 Identities=16% Similarity=0.185 Sum_probs=215.5
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCH------HCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCCCC
Q ss_conf 77988999999999998298776410------002764028999998887349973377405652012220234677887
Q gi|254780604|r 58 MGKHPKVIENAQRTFEKCGIGAGGTR------NIAGTNYYHVMLEKELATLHGKKAALIFNSGYIANWATIGTLCSQIDN 131 (401)
Q Consensus 58 L~~~p~v~~a~~~a~~~~G~~~~~sr------~~~G~~~~~~~LE~~la~~~g~e~al~~~SG~~An~~~i~~l~~~~d~ 131 (401)
T Consensus 23 iQrGGiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~ 102 (382)
T COG1103 23 IQRGGILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDW 102 (382)
T ss_pred HHCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCE
T ss_conf 34068687999999998648863443104574110258858889998898719863442365125679999975158988
Q ss_pred EEEEHHHHHHHHHHHHHHHCCCCEEEECCC-------CHHHHHHHHHHCCCC---CCCEEE---CCCCCCCCCCHHHHHH
Q ss_conf 234213211167520145316513531679-------988988867406633---562362---1674356773368999
Q gi|254780604|r 132 IICFSDSHNHASIIEGINKARCKKVIWNHN-------DLEDLEKNLAATDLS---IPKIII---FESIYSMDGDIAPIKE 198 (401)
Q Consensus 132 ii~~~D~~~HaSi~~g~~l~~a~~~~f~Hn-------D~~~Le~~L~~~~~~---~~~iIv---~e~v~Sm~G~~apL~~ 198 (401)
T Consensus 103 vV~--D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~Y---GNl~Dakk 177 (382)
T COG1103 103 VVV--DSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEY---GNLADAKK 177 (382)
T ss_pred EEE--CCCCHHHHHHHHHHCCCEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC---CCCHHHHH
T ss_conf 997--4742278899998639758966789998457668888999999986248984489996357775---77221678
Q ss_pred HHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCE--EEEECCHHHHHHH-HCCCCCC--
Q ss_conf 9998401471899712110012560258999997202001011014443222231--6875484450000-0133222--
Q gi|254780604|r 199 ICDLADQYNAITYIDEVHAVGIHGSCGAGISEREGIMNRITIISGTLAKGFGTFG--GYIAASENLCDFI-RSFASGF-- 273 (401)
Q Consensus 199 l~~l~~~~~~~LivDEAH~~Gv~G~~G~G~~~~~g~~~~~di~~~TlsKa~g~~G--G~i~g~~~~~~~l-~~~~~~~-- 273 (401)
T Consensus 178 va~ic~e~gvPlllN~AYt~Grmpvs--------~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~ 249 (382)
T COG1103 178 VAKICREYGVPLLLNCAYTVGRMPVS--------GKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPK 249 (382)
T ss_pred HHHHHHHCCCCEEEECCEEECCCCCC--------CCCCCCCEEEECCCCCHHCCCCEEEEEEHHHHHHHHHHHCCCCCCC
T ss_conf 99999872995685121022321136--------6556787797248530011487047751367778998631544653
Q ss_pred -----CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCEEEEEECCHHHHHHHHH--
Q ss_conf -----3334444314788998764320120168888999987666566449-83037898659999689799999999--
Q gi|254780604|r 274 -----IFSTSLPPAIASASVTSIQYIKQHYDERKKYLERVKQLRHSLENKA-IPCIPNESHIIPIMVGDSHKCTQISN-- 345 (401)
Q Consensus 274 -----ifs~~l~p~~~aa~~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~g-~~~~~~~s~Ivpi~~g~~~~~~~~~~-- 345 (401)
T Consensus 250 KEvellGCT~r-GapivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~ 328 (382)
T COG1103 250 KEVELLGCTVR-GAPIVTLMASFPHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKH 328 (382)
T ss_pred CEEEEECCCCC-CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHC
T ss_conf 32566143246-84389987407799999987889999999999999974308871779765642553371289998757
Q ss_pred --------HHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf --------9997379099840488888887218996185799999999999999999974
Q gi|254780604|r 346 --------ILLKEFGIYIQPINYPTVAKKKERLRVTLTPLHTDSDIEHLVSSLENVWQKM 397 (401)
Q Consensus 346 --------~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l~a~ht~edid~~~~~l~~v~~~l 397 (401)
T Consensus 329 ~r~gyFlY~ELK~RgI~--GI~~----G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 329 KRKGYFLYEELKKRGIH--GIQP----GQTKYFKLSV-YGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred CCCCEEEHHHHHHCCCC--CCCC----CCEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHC
T ss_conf 67854668988765866--5066----7513788875-0577999999999999999861