HHsearch alignment for GI: 254780604 and conserved domain: COG1168
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].
Probab=99.66 E-value=2.5e-13 Score=105.68 Aligned_cols=317 Identities=15% Similarity=0.161 Sum_probs=190.2
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHC----CC---CCEEEEECC-CCCHHHHHCCCCCC
Q ss_conf 67798899999999999829877641000276402899999888734----99---733774056-52012220234677
Q gi|254780604|r 57 GMGKHPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELATLH----GK---KAALIFNSG-YIANWATIGTLCSQ 128 (401)
Q Consensus 57 gL~~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~~~----g~---e~al~~~SG-~~An~~~i~~l~~~ 128 (401)
T Consensus 36 Df~~pp~i~~Al~~rvdh-G--------vfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~ 106 (388)
T COG1168 36 DFPTPPEIIEALRERVDH-G--------VFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKP 106 (388)
T ss_pred CCCCCHHHHHHHHHHHHC-C--------CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCC
T ss_conf 678887999999999865-8--------7788788778999999999971377788552898375127699999983769
Q ss_pred CCCEEEEHHHHHHHHHHHHHHHCCCCEEEEC--------CCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCH---HHHH
Q ss_conf 8872342132111675201453165135316--------7998898886740663356236216743567733---6899
Q gi|254780604|r 129 IDNIICFSDSHNHASIIEGINKARCKKVIWN--------HNDLEDLEKNLAATDLSIPKIIIFESIYSMDGDI---APIK 197 (401)
Q Consensus 129 ~d~ii~~~D~~~HaSi~~g~~l~~a~~~~f~--------HnD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~---apL~ 197 (401)
T Consensus 107 gd~Vvi~t--PvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~--vkl~iLCnPHNP-~Grvwt~eeL~ 181 (388)
T COG1168 107 GDGVVIQT--PVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDER--VKLFILCNPHNP-TGRVWTKEELR 181 (388)
T ss_pred CCEEEECC--CCCHHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHCCC--CCEEEEECCCCC-CCCCCCHHHHH
T ss_conf 98269648--88618999875169679746643469847752999999984377--608999379999-98643699999
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCC---CCCHHHCCCCCCCCCCE---E-EEECCHHHHH-HHHCC
Q ss_conf 999984014718997121100125602589999972020---01011014443222231---6-8754844500-00013
Q gi|254780604|r 198 EICDLADQYNAITYIDEVHAVGIHGSCGAGISEREGIMN---RITIISGTLAKGFGTFG---G-YIAASENLCD-FIRSF 269 (401)
Q Consensus 198 ~l~~l~~~~~~~LivDEAH~~Gv~G~~G~G~~~~~g~~~---~~di~~~TlsKa~g~~G---G-~i~g~~~~~~-~l~~~ 269 (401)
T Consensus 182 ~i~elc~kh~v~VISDEIHaDlv~~g~~h--~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l 259 (388)
T COG1168 182 KIAELCLRHGVRVISDEIHADLVLGGHKH--IPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRL 259 (388)
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCCC--CCHHHCCHHHHCCEEEEEECCCCCCCHHHHHEEEEECCHHHHHHHHHHH
T ss_conf 99999998399898303356612169876--6543269554323599840522156044442147834889999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCC-CEEEEEE---CCHHHHHH
Q ss_conf 322233344443147889987643201-2016888899998766656644--983037898-6599996---89799999
Q gi|254780604|r 270 ASGFIFSTSLPPAIASASVTSIQYIKQ-HYDERKKYLERVKQLRHSLENK--AIPCIPNES-HIIPIMV---GDSHKCTQ 342 (401)
Q Consensus 270 ~~~~ifs~~l~p~~~aa~~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~--g~~~~~~~s-~Ivpi~~---g~~~~~~~ 342 (401)
T Consensus 260 ~~--~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l~d--~~ 335 (388)
T COG1168 260 KR--NGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGLDD--SE 335 (388)
T ss_pred HH--HCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCH--HH
T ss_conf 87--337998468899999999726499999999999989999999986598747866887566653200238985--78
Q ss_pred HHHHHHHHCCEEEEEE-CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999997379099840-488888887218996185799999999999999999974
Q gi|254780604|r 343 ISNILLKEFGIYIQPI-NYPTVAKKKERLRVTLTPLHTDSDIEHLVSSLENVWQKM 397 (401)
Q Consensus 343 ~~~~lL~e~Gi~v~~i-~~PtVp~g~~rlRi~l~a~ht~edid~~~~~l~~v~~~l 397 (401)
T Consensus 336 l~~~ll~~akVal~~G~~F--G~~g~gf~RlN~--acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 336 LAEFLLEEAKVALSPGSTF--GEEGSGFVRLNF--ACPRAILEEALERLKRALKKR 387 (388)
T ss_pred HHHHHHHHHCEECCCCCCC--CCCCCCEEEEEC--CCCHHHHHHHHHHHHHHHHCC
T ss_conf 9999997515713578756--767874588863--798899999999999998525