HHsearch alignment for GI: 254780604 and conserved domain: COG3977
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism].
Probab=99.28 E-value=3.6e-09 Score=78.93 Aligned_cols=228 Identities=21% Similarity=0.215 Sum_probs=142.4
Q ss_pred CCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHH---HHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 79988988867406633562362167435677336---899999984014718997121100125602589999972020
Q gi|254780604|r 160 HNDLEDLEKNLAATDLSIPKIIIFESIYSMDGDIA---PIKEICDLADQYNAITYIDEVHAVGIHGSCGAGISEREGIMN 236 (401)
Q Consensus 160 HnD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~a---pL~~l~~l~~~~~~~LivDEAH~~Gv~G~~G~G~~~~~g~~~ 236 (401)
T Consensus 168 ~vDF~~l~i~-----e~~g~ic~SRPtNP-TGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~---iifsd~~~~w~ 238 (417)
T COG3977 168 HVDFEHLHIG-----ESTGAICVSRPTNP-TGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPG---IIFSDATPLWN 238 (417)
T ss_pred CCCHHHHCCC-----CCEEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC---EECCCCCCCCC
T ss_conf 3778881336-----76026996478898-877364889998998742238967973566799786---20035641567
Q ss_pred CCCHHHCCCCCCC--CCCEEEEECCHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHHHHHHHH--C---CHHHHHHHHHHH
Q ss_conf 0101101444322--2231687548445000001332-223334444314788998764320--1---201688889999
Q gi|254780604|r 237 RITIISGTLAKGF--GTFGGYIAASENLCDFIRSFAS-GFIFSTSLPPAIASASVTSIQYIK--Q---HYDERKKYLERV 308 (401)
Q Consensus 237 ~~di~~~TlsKa~--g~~GG~i~g~~~~~~~l~~~~~-~~ifs~~l~p~~~aa~~~al~~l~--~---~~~~~~~l~~~~ 308 (401)
T Consensus 239 ~NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aiaa~mie~gdl~rlseqVIrPFY~~~~q~~~ 318 (417)
T COG3977 239 ENIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTI 318 (417)
T ss_pred CCEEEEEEHHHCCCCCCEEEEEECCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87788831433489873035796269999999711453531678756899998860242888999864388898899999
Q ss_pred HHHHHHHHHCCCCCCCCCCCEEEE-EECCH-HHHHHHHHHHHHHCCEEEEEE--CCCCCCC----CCCEEEEECCCCCCH
Q ss_conf 876665664498303789865999-96897-999999999997379099840--4888888----872189961857999
Q gi|254780604|r 309 KQLRHSLENKAIPCIPNESHIIPI-MVGDS-HKCTQISNILLKEFGIYIQPI--NYPTVAK----KKERLRVTLTPLHTD 380 (401)
Q Consensus 309 ~~l~~~L~~~g~~~~~~~s~Ivpi-~~g~~-~~~~~~~~~lL~e~Gi~v~~i--~~PtVp~----g~~rlRi~l~a~ht~ 380 (401)
T Consensus 319 ~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~-LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~--~~~ 395 (417)
T COG3977 319 AILRRYLPEYRCLIHKPEGAIFLWLWFKDLPITTEELYQR-LKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYV--PEP 395 (417)
T ss_pred HHHHHHCCCCCEEEECCCCCEEEHHHHCCCCCCHHHHHHH-HHHCEEEEECCCCCCCCCCCCCCCCCCEEEEECC--CCH
T ss_conf 9999865776525426875154133553587668999999-9868689944632478999888761224787536--987
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999997431
Q gi|254780604|r 381 SDIEHLVSSLENVWQKMNR 399 (401)
Q Consensus 381 edid~~~~~l~~v~~~l~~ 399 (401)
T Consensus 396 e~ie~Gva~lae~ve~~yq 414 (417)
T COG3977 396 EKIEKGVAILAEEVERAYQ 414 (417)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999974