HHsearch alignment for GI: 254780604 and conserved domain: KOG1411
>KOG1411 consensus.
Probab=91.92 E-value=1 Score=24.50 Aligned_cols=225 Identities=18% Similarity=0.258 Sum_probs=109.3
Q ss_pred HHHCCCCEEEECCC-------CHHHHHHHHHHCCCCCCCEEECCC----CCCCCCCHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 45316513531679-------988988867406633562362167----4356773368999999840147189971211
Q gi|254780604|r 148 INKARCKKVIWNHN-------DLEDLEKNLAATDLSIPKIIIFES----IYSMDGDIAPIKEICDLADQYNAITYIDEVH 216 (401)
Q Consensus 148 ~~l~~a~~~~f~Hn-------D~~~Le~~L~~~~~~~~~iIv~e~----v~Sm~G~~apL~~l~~l~~~~~~~LivDEAH 216 (401)
T Consensus 163 f~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~g-s-~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAY 240 (427)
T KOG1411 163 FKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEG-S-IILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAY 240 (427)
T ss_pred CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCC-C-EEEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 002586125666305410013567789987417888-4-89852210388788960888999998765403561466554
Q ss_pred CCCCCCCHHH--HHHHHHHCCCCCCHHHCCCCCCCCCCE----EE-EEC-CHHH----HHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 0012560258--999997202001011014443222231----68-754-8445----0000013322233344443147
Q gi|254780604|r 217 AVGIHGSCGA--GISEREGIMNRITIISGTLAKGFGTFG----GY-IAA-SENL----CDFIRSFASGFIFSTSLPPAIA 284 (401)
Q Consensus 217 ~~Gv~G~~G~--G~~~~~g~~~~~di~~~TlsKa~g~~G----G~-i~g-~~~~----~~~l~~~~~~~ifs~~l~p~~~ 284 (401)
T Consensus 241 QGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRp-mYSn--PP~hG 317 (427)
T KOG1411 241 QGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRP-MYSN--PPLHG 317 (427)
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHCCHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCC-CCCC--CCCCC
T ss_conf 04235870245789999987077567655565523203320350578726788888788778888601-1358--98651
Q ss_pred HHHHHHHHHHHCC----------HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE---EE--EEECCHHHHHHHHHHHHH
Q ss_conf 8899876432012----------01688889999876665664498303789865---99--996897999999999997
Q gi|254780604|r 285 SASVTSIQYIKQH----------YDERKKYLERVKQLRHSLENKAIPCIPNESHI---IP--IMVGDSHKCTQISNILLK 349 (401)
Q Consensus 285 aa~~~al~~l~~~----------~~~~~~l~~~~~~l~~~L~~~g~~~~~~~s~I---vp--i~~g~~~~~~~~~~~lL~ 349 (401)
T Consensus 318 ArIv~--~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~--~W~hI~~QIGMF~fTgl~p---eQv~~l~k 390 (427)
T KOG1411 318 ARIVA--TILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPG--NWSHITKQIGMFCFTGLNP---EQVDWLTK 390 (427)
T ss_pred HHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CHHHHHHHHHEEEECCCCH---HHHHHHHH
T ss_conf 14555--40477677778888899987766556888767763579876--6799997620033247899---99999876
Q ss_pred HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 37909984048888888721899618579999999999999999997
Q gi|254780604|r 350 EFGIYIQPINYPTVAKKKERLRVTLTPLHTDSDIEHLVSSLENVWQK 396 (401)
Q Consensus 350 e~Gi~v~~i~~PtVp~g~~rlRi~l~a~ht~edid~~~~~l~~v~~~ 396 (401)
T Consensus 391 e~~iYmT---------~d--GRiS~a-G~ss~nV~yLa~aih~vtk~ 425 (427)
T KOG1411 391 EYHIYLT---------KD--GRISMA-GLSSSNVPYLADAIHAVTKN 425 (427)
T ss_pred HHEEEEC---------CC--CEEEEC-CCCCCCCCCCCHHHHHHHCC
T ss_conf 5236652---------58--637623-45656775411106767437