HHsearch alignment for GI: 254780604 and conserved domain: PRK00854

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed.
Probab=100.00  E-value=3.3e-32  Score=227.04  Aligned_cols=349  Identities=17%  Similarity=0.211  Sum_probs=242.8

Q ss_pred             HHCCCCCEEECCCCCCCCCCCCEEEECCCCEEEEEECCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCH
Q ss_conf             983997535001345555763102314798689981144---74667798899999999999829877641000276402
Q gi|254780604|r   15 HHEKRYRFFTELAYEQYQFPYAIHNSDEGSRKVTIWCSN---DYLGMGKHPKVIENAQRTFEKCGIGAGGTRNIAGTNYY   91 (401)
Q Consensus        15 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~sn---dYLgL~~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~   91 (401)
T Consensus        18 ~~~~~y~p~Piv-i~ra~---G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~l~~~---~~~~--~~~~   87 (404)
T PRK00854         18 LGAHNYKPLDVV-LTRGE---GVWVWDTDGRRYLDCLSAYSAVNQGH-CHPKILAAMVEQAGRLTLT---SRAF--RNDQ   87 (404)
T ss_pred             HCCCCCCCCCEE-EEEEE---CCEEEECCCCEEEECCCCHHHHHHCC-CCHHHHHHHHHHHHHCCCC---CCCC--CCHH
T ss_conf             458888989847-99857---59999799999988262999775427-9799999999998567865---5542--6579


Q ss_pred             HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCC----------CCCCCEEEEHHHHHHHHHHHHHHHCCC--------
Q ss_conf             89999988873499733774056520122202346----------778872342132111675201453165--------
Q gi|254780604|r   92 HVMLEKELATLHGKKAALIFNSGYIANWATIGTLC----------SQIDNIICFSDSHNHASIIEGINKARC--------  153 (401)
Q Consensus        92 ~~~LE~~la~~~g~e~al~~~SG~~An~~~i~~l~----------~~~d~ii~~~D~~~HaSi~~g~~l~~a--------  153 (401)
T Consensus        88 ~~~l~~~l~~~~~~~~v~f~~SGsEAve~AiklAr~~~~~~~g~~tgr~~ii~~~-~~yHG~t~~~~s~s~~~~~~~~~~  166 (404)
T PRK00854         88 LAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCA-DNFHGRTLSIVGFSTDPDARGGFG  166 (404)
T ss_pred             HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC-CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             9999999974037684885587799999999999998765037878985599964-566786013543467743356888


Q ss_pred             ----CEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHH----HHHHHHHHHCCCCEEEECCCCCCCCCCCHH
Q ss_conf             ----135316799889888674066335623621674356773368----999999840147189971211001256025
Q gi|254780604|r  154 ----KKVIWNHNDLEDLEKNLAATDLSIPKIIIFESIYSMDGDIAP----IKEICDLADQYNAITYIDEVHAVGIHGSCG  225 (401)
Q Consensus       154 ----~~~~f~HnD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~ap----L~~l~~l~~~~~~~LivDEAH~~Gv~G~~G  225 (401)
T Consensus       167 ~~~~~~~~~p~~d~~~l~~~~~~---~~-aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-TG-fGRtG  240 (404)
T PRK00854        167 PFAPGFRVVPFGDAAALEAAITP---NT-VAFLIEPIQGEAGVIIPPAGYFRRVRELCTANNVTLILDEIQ-TG-LGRTG  240 (404)
T ss_pred             CCCCCCEEECCCCHHHHHHHHCC---CE-EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC-CC-CCCCC
T ss_conf             99998155056668999986398---74-899991775778961799899999999999707644575000-17-86355


Q ss_pred             HHHH-HHHHCCCCCCHHHCCCCCCCCC---CEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
Q ss_conf             8999-9972020010110144432222---31687548445000001332223334444314788998764320120168
Q gi|254780604|r  226 AGIS-EREGIMNRITIISGTLAKGFGT---FGGYIAASENLCDFIRSFASGFIFSTSLPPAIASASVTSIQYIKQHYDER  301 (401)
Q Consensus       226 ~G~~-~~~g~~~~~di~~~TlsKa~g~---~GG~i~g~~~~~~~l~~~~~~~ifs~~l~p~~~aa~~~al~~l~~~~~~~  301 (401)
T Consensus       241 ~~fa~e~~gv~PD--ii--~~gKgl~gG~~Pl~av~~~~~i~~~~~~~~h~~T~--~gnpla~aaa~a~l~~i~~e-~l~  313 (404)
T PRK00854        241 KLLAEEHEGIEAD--VT--LIGKALSGGFYPVSAVLSNSEVLGVLRPGQHGSTF--GGNPLACAVARAALRVLVEE-GMI  313 (404)
T ss_pred             CCCHHHHCCCCCC--EE--EECCCCCCCCCCCCEEECCHHHHHHCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHC-CHH
T ss_conf             7414554248979--89--75644458876532020479999506798877888--98989999999999999865-899


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCC---CCCCCEEEEEE-CCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCC
Q ss_conf             8889999876665664498303---78986599996-8979999999999973790998404888888872189961857
Q gi|254780604|r  302 KKYLERVKQLRHSLENKAIPCI---PNESHIIPIMV-GDSHKCTQISNILLKEFGIYIQPINYPTVAKKKERLRVTLTPL  377 (401)
Q Consensus       302 ~~l~~~~~~l~~~L~~~g~~~~---~~~s~Ivpi~~-g~~~~~~~~~~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l~a~  377 (401)
T Consensus       314 ~~~~~~g~~l~~~L~~l~~~~i~~VRG~Glm~gve~~~~~~~~~~~~~~~~-~~Gll~~~~-------~~~~ir~~PPL~  385 (404)
T PRK00854        314 ENAAEQGAYFLEGLRAIRGNIVREVRGRGLMLAVELEPEAGGARQYCEALK-ARGLLAKDT-------HDHTIRLAPPLV  385 (404)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCHHHHHHHHHHHH-HCCEEECCC-------CCCEEEEECCCC
T ss_conf             999999999999998504897276644455999998556677999999999-799598748-------999899979957


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999
Q gi|254780604|r  378 HTDSDIEHLVSSLENVWQ  395 (401)
Q Consensus       378 ht~edid~~~~~l~~v~~  395 (401)
T Consensus       386 it~~eid~~l~~l~~~La  403 (404)
T PRK00854        386 ITREQVDWAVSQIAKVLA  403 (404)
T ss_pred             CCHHHHHHHHHHHHHHHC
T ss_conf             899999999999999966