HHsearch alignment for GI: 254780604 and conserved domain: PRK00854
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed.
Probab=100.00 E-value=3.3e-32 Score=227.04 Aligned_cols=349 Identities=17% Similarity=0.211 Sum_probs=242.8
Q ss_pred HHCCCCCEEECCCCCCCCCCCCEEEECCCCEEEEEECCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCH
Q ss_conf 983997535001345555763102314798689981144---74667798899999999999829877641000276402
Q gi|254780604|r 15 HHEKRYRFFTELAYEQYQFPYAIHNSDEGSRKVTIWCSN---DYLGMGKHPKVIENAQRTFEKCGIGAGGTRNIAGTNYY 91 (401)
Q Consensus 15 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~sn---dYLgL~~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~ 91 (401)
T Consensus 18 ~~~~~y~p~Piv-i~ra~---G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~l~~~---~~~~--~~~~ 87 (404)
T PRK00854 18 LGAHNYKPLDVV-LTRGE---GVWVWDTDGRRYLDCLSAYSAVNQGH-CHPKILAAMVEQAGRLTLT---SRAF--RNDQ 87 (404)
T ss_pred HCCCCCCCCCEE-EEEEE---CCEEEECCCCEEEECCCCHHHHHHCC-CCHHHHHHHHHHHHHCCCC---CCCC--CCHH
T ss_conf 458888989847-99857---59999799999988262999775427-9799999999998567865---5542--6579
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCC----------CCCCCEEEEHHHHHHHHHHHHHHHCCC--------
Q ss_conf 89999988873499733774056520122202346----------778872342132111675201453165--------
Q gi|254780604|r 92 HVMLEKELATLHGKKAALIFNSGYIANWATIGTLC----------SQIDNIICFSDSHNHASIIEGINKARC-------- 153 (401)
Q Consensus 92 ~~~LE~~la~~~g~e~al~~~SG~~An~~~i~~l~----------~~~d~ii~~~D~~~HaSi~~g~~l~~a-------- 153 (401)
T Consensus 88 ~~~l~~~l~~~~~~~~v~f~~SGsEAve~AiklAr~~~~~~~g~~tgr~~ii~~~-~~yHG~t~~~~s~s~~~~~~~~~~ 166 (404)
T PRK00854 88 LAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCA-DNFHGRTLSIVGFSTDPDARGGFG 166 (404)
T ss_pred HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC-CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999974037684885587799999999999998765037878985599964-566786013543467743356888
Q ss_pred ----CEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHH----HHHHHHHHHCCCCEEEECCCCCCCCCCCHH
Q ss_conf ----135316799889888674066335623621674356773368----999999840147189971211001256025
Q gi|254780604|r 154 ----KKVIWNHNDLEDLEKNLAATDLSIPKIIIFESIYSMDGDIAP----IKEICDLADQYNAITYIDEVHAVGIHGSCG 225 (401)
Q Consensus 154 ----~~~~f~HnD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~ap----L~~l~~l~~~~~~~LivDEAH~~Gv~G~~G 225 (401)
T Consensus 167 ~~~~~~~~~p~~d~~~l~~~~~~---~~-aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-TG-fGRtG 240 (404)
T PRK00854 167 PFAPGFRVVPFGDAAALEAAITP---NT-VAFLIEPIQGEAGVIIPPAGYFRRVRELCTANNVTLILDEIQ-TG-LGRTG 240 (404)
T ss_pred CCCCCCEEECCCCHHHHHHHHCC---CE-EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC-CC-CCCCC
T ss_conf 99998155056668999986398---74-899991775778961799899999999999707644575000-17-86355
Q ss_pred HHHH-HHHHCCCCCCHHHCCCCCCCCC---CEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
Q ss_conf 8999-9972020010110144432222---31687548445000001332223334444314788998764320120168
Q gi|254780604|r 226 AGIS-EREGIMNRITIISGTLAKGFGT---FGGYIAASENLCDFIRSFASGFIFSTSLPPAIASASVTSIQYIKQHYDER 301 (401)
Q Consensus 226 ~G~~-~~~g~~~~~di~~~TlsKa~g~---~GG~i~g~~~~~~~l~~~~~~~ifs~~l~p~~~aa~~~al~~l~~~~~~~ 301 (401)
T Consensus 241 ~~fa~e~~gv~PD--ii--~~gKgl~gG~~Pl~av~~~~~i~~~~~~~~h~~T~--~gnpla~aaa~a~l~~i~~e-~l~ 313 (404)
T PRK00854 241 KLLAEEHEGIEAD--VT--LIGKALSGGFYPVSAVLSNSEVLGVLRPGQHGSTF--GGNPLACAVARAALRVLVEE-GMI 313 (404)
T ss_pred CCCHHHHCCCCCC--EE--EECCCCCCCCCCCCEEECCHHHHHHCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHC-CHH
T ss_conf 7414554248979--89--75644458876532020479999506798877888--98989999999999999865-899
Q ss_pred HHHHHHHHHHHHHHHHCCCCCC---CCCCCEEEEEE-CCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCC
Q ss_conf 8889999876665664498303---78986599996-8979999999999973790998404888888872189961857
Q gi|254780604|r 302 KKYLERVKQLRHSLENKAIPCI---PNESHIIPIMV-GDSHKCTQISNILLKEFGIYIQPINYPTVAKKKERLRVTLTPL 377 (401)
Q Consensus 302 ~~l~~~~~~l~~~L~~~g~~~~---~~~s~Ivpi~~-g~~~~~~~~~~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l~a~ 377 (401)
T Consensus 314 ~~~~~~g~~l~~~L~~l~~~~i~~VRG~Glm~gve~~~~~~~~~~~~~~~~-~~Gll~~~~-------~~~~ir~~PPL~ 385 (404)
T PRK00854 314 ENAAEQGAYFLEGLRAIRGNIVREVRGRGLMLAVELEPEAGGARQYCEALK-ARGLLAKDT-------HDHTIRLAPPLV 385 (404)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCHHHHHHHHHHHH-HCCEEECCC-------CCCEEEEECCCC
T ss_conf 999999999999998504897276644455999998556677999999999-799598748-------999899979957
Q ss_pred CCHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999
Q gi|254780604|r 378 HTDSDIEHLVSSLENVWQ 395 (401)
Q Consensus 378 ht~edid~~~~~l~~v~~ 395 (401)
T Consensus 386 it~~eid~~l~~l~~~La 403 (404)
T PRK00854 386 ITREQVDWAVSQIAKVLA 403 (404)
T ss_pred CCHHHHHHHHHHHHHHHC
T ss_conf 899999999999999966