HHsearch alignment for GI: 254780604 and conserved domain: PRK03262

>PRK03262 consensus.
Probab=99.91  E-value=4e-21  Score=155.80  Aligned_cols=330  Identities=17%  Similarity=0.227  Sum_probs=203.3

Q ss_pred             CCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCC-CCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             9878999999999998399753500134555576310231479868998114474-667798899999999999829877
Q gi|254780604|r    1 MDFEKFFKDQINYLHHEKRYRFFTELAYEQYQFPYAIHNSDEGSRKVTIWCSNDY-LGMGKHPKVIENAQRTFEKCGIGA   79 (401)
Q Consensus         1 m~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~sndY-LgL~~~p~v~~a~~~a~~~~G~~~   79 (401)
T Consensus         3 ~~~~~l~r~~i~~---------l~pY~~~--~~--------~~~~~~ikL~sNEnP~~~~--~~~~---~~~lnrYP---   55 (355)
T PRK03262          3 MSITDLARENVRN---------LTPYQSA--RR--------LGGNGDVWLNANEYPTAVE--FQLT---QQTLNRYP---   55 (355)
T ss_pred             CCHHHHHCHHHCC---------CCCCCCC--CC--------CCCCCCEEEECCCCCCCCC--HHHH---HHHHCCCC---
T ss_conf             6889885865267---------8998873--44--------7999988957899999984--8776---78870398---


Q ss_pred             CCCHHCCCCCCHHHHHHHHHHHHCCCCC-EEEEECCCCCHH-HHHCCCCCCC-CCEEEEHHHHHHHHHH-HHHHHCCCCE
Q ss_conf             6410002764028999998887349973-377405652012-2202346778-8723421321116752-0145316513
Q gi|254780604|r   80 GGTRNIAGTNYYHVMLEKELATLHGKKA-ALIFNSGYIANW-ATIGTLCSQI-DNIICFSDSHNHASII-EGINKARCKK  155 (401)
Q Consensus        80 ~~sr~~~G~~~~~~~LE~~la~~~g~e~-al~~~SG~~An~-~~i~~l~~~~-d~ii~~~D~~~HaSi~-~g~~l~~a~~  155 (401)
T Consensus        56 ---------D~~~~~Lr~aiA~~~gv~~~~I~vGnGSdE~I~~i~~~f~~pg~d~vl~~~Pt---F~~Y~~~a~~~g~~~  123 (355)
T PRK03262         56 ---------ECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPT---YGMYAVSAETIGVEI  123 (355)
T ss_pred             ---------CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHHHCCCCCEEEECCCC---HHHHHHHHHHCCCEE
T ss_conf             ---------99889999999998685855799937899999999999863899779977888---599999999739838


Q ss_pred             EEECC-----CCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCC--CCEEEECCCCCCCCCCCHHHHH
Q ss_conf             53167-----9988988867406633562362167435677336899999984014--7189971211001256025899
Q gi|254780604|r  156 VIWNH-----NDLEDLEKNLAATDLSIPKIIIFESIYSMDGDIAPIKEICDLADQY--NAITYIDEVHAVGIHGSCGAGI  228 (401)
Q Consensus       156 ~~f~H-----nD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~apL~~l~~l~~~~--~~~LivDEAH~~Gv~G~~G~G~  228 (401)
T Consensus       124 ~~vp~~~~~~~dl~~~~~~~---~-~-~klv~l~nPNNPTG~~~~~~el~~l~~~~~~~~lvVvDEAY~eF~~~~s~~~-  197 (355)
T PRK03262        124 RTVPTLENWQLDLQAIADNL---D-G-VKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAG-  197 (355)
T ss_pred             EEEECCCCCCCCHHHHHHHC---C-C-CCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCHHH-
T ss_conf             99646556676899999640---4-8-8889976899987644699999999976876728987302554365621556-


Q ss_pred             HHHHHCCCCCCHHHCCCCCCCCCCE---EEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH--HHCCHHHHHH
Q ss_conf             9997202001011014443222231---6875484450000013322233344443147889987643--2012016888
Q gi|254780604|r  229 SEREGIMNRITIISGTLAKGFGTFG---GYIAASENLCDFIRSFASGFIFSTSLPPAIASASVTSIQY--IKQHYDERKK  303 (401)
Q Consensus       229 ~~~~g~~~~~di~~~TlsKa~g~~G---G~i~g~~~~~~~l~~~~~~~ifs~~l~p~~~aa~~~al~~--l~~~~~~~~~  303 (401)
T Consensus       198 --l~~~~~N-liVlRTfSK~~gLAGlRlGy~ia~~~ii~~l~k~~~p~~----vn~~~~~~a~~al~~~~~~~~~~~i~~  270 (355)
T PRK03262        198 --WLAEYPN-LVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPYP----LSTPVADIAAQALSPQGIEAMRERVAQ  270 (355)
T ss_pred             --HHHCCCC-EEEEECHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCC----CCHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             --7640774-467612677724665350543179999999998438998----779999999999722659999999999


Q ss_pred             HHHHHHHHHHHHHHCCC--CCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEE-CCCCCCCCCCEEEEECCCCCCH
Q ss_conf             89999876665664498--30378986599996897999999999997379099840-4888888872189961857999
Q gi|254780604|r  304 YLERVKQLRHSLENKAI--PCIPNESHIIPIMVGDSHKCTQISNILLKEFGIYIQPI-NYPTVAKKKERLRVTLTPLHTD  380 (401)
Q Consensus       304 l~~~~~~l~~~L~~~g~--~~~~~~s~Ivpi~~g~~~~~~~~~~~lL~e~Gi~v~~i-~~PtVp~g~~rlRi~l~a~ht~  380 (401)
T Consensus       271 i~~~R~~l~~~L~~l~~~~~v~pS~aNFvl~~~~~~---~~~~~~L~-~~gIlVR~~~~~~gl~---~~lRisig---t~  340 (355)
T PRK03262        271 INANRAWLIAALKEIACVEQVFDSETNYILARFTAS---SAVFKSLW-DQGIILRDQNKQPSLS---NCLRITIG---TR  340 (355)
T ss_pred             HHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECCCH---HHHHHHHH-HCCCEEEECCCCCCCC---CEEEEECC---CH
T ss_conf             999999999999848998606899782899978999---99999999-6993896688878999---98999669---99


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254780604|r  381 SDIEHLVSSLEN  392 (401)
Q Consensus       381 edid~~~~~l~~  392 (401)
T Consensus       341 een~~~l~aLka  352 (355)
T PRK03262        341 EECQRVIDALRA  352 (355)
T ss_pred             HHHHHHHHHHCC
T ss_conf             999999999713