HHsearch alignment for GI: 254780604 and conserved domain: PRK04073
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional.
Probab=100.00 E-value=1.9e-32 Score=228.67 Aligned_cols=351 Identities=17% Similarity=0.232 Sum_probs=244.8
Q ss_pred HHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCEEEEEECCC-CCCCCCC-CHHHHHHHHHHHHHHCCCCCCCHHCCCC
Q ss_conf 9999983997535001345555763102314798689981144-7466779-8899999999999829877641000276
Q gi|254780604|r 11 INYLHHEKRYRFFTELAYEQYQFPYAIHNSDEGSRKVTIWCSN-DYLGMGK-HPKVIENAQRTFEKCGIGAGGTRNIAGT 88 (401)
Q Consensus 11 l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~sn-dYLgL~~-~p~v~~a~~~a~~~~G~~~~~sr~~~G~ 88 (401)
T Consensus 10 ~~~~y~~~~y~~~P~~-i~rg~---G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~---~~~~--~ 80 (396)
T PRK04073 10 LTNHYGAHNYHPLPIV-ISEAE---GVWVKDPEGNKYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLT---SRAF--H 80 (396)
T ss_pred HHHHHCCCCCCCCCCE-EEEEE---CCEEEECCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCCC---CCCC--C
T ss_conf 9876267888999962-89736---599998989999994517887630379799999999998417876---6532--4
Q ss_pred CCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCC---------CCCC-CEEEEHHHHHHHHHHHHHHHCCC-----
Q ss_conf 40289999988873499733774056520122202346---------7788-72342132111675201453165-----
Q gi|254780604|r 89 NYYHVMLEKELATLHGKKAALIFNSGYIANWATIGTLC---------SQID-NIICFSDSHNHASIIEGINKARC----- 153 (401)
Q Consensus 89 ~~~~~~LE~~la~~~g~e~al~~~SG~~An~~~i~~l~---------~~~d-~ii~~~D~~~HaSi~~g~~l~~a----- 153 (401)
T Consensus 81 ~~~~~~~~e~l~~l~~~~~v~f~~sGseAvE~AlklAr~~~~~~~~~~~~r~~ii~~-~~~yHG~t~~~~s~t~~~~~~~ 159 (396)
T PRK04073 81 SDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIAC-EGNFHGRTMAAVSLSSEAEYKR 159 (396)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE-CCCCCCCCCCHHHCCCCCCCCC
T ss_conf 347899999999752836489618788899999999999987623788898779997-7750045320522267643345
Q ss_pred -------CEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHH----HHHHHHHHHCCCCEEEECCCCCCCCCC
Q ss_conf -------135316799889888674066335623621674356773368----999999840147189971211001256
Q gi|254780604|r 154 -------KKVIWNHNDLEDLEKNLAATDLSIPKIIIFESIYSMDGDIAP----IKEICDLADQYNAITYIDEVHAVGIHG 222 (401)
Q Consensus 154 -------~~~~f~HnD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~ap----L~~l~~l~~~~~~~LivDEAH~~Gv~G 222 (401)
T Consensus 160 ~~~p~~~~~~~~p~~d~~~l~~~~~~---~~-AAvi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tG-fG 233 (396)
T PRK04073 160 GFGPMLPGIKKIPYGDVEALKAAITP---NT-AAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQ-TG-LG 233 (396)
T ss_pred CCCCCCCCCEECCCCHHHHHHHHCCC---CE-EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCE-EC-CC
T ss_conf 77899998232575216678861489---75-699998987778977899899999999999839935266341-07-88
Q ss_pred CHHHHHH-HHHHCCCCCCHHHCCCCCCCCCC---EEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCH
Q ss_conf 0258999-99720200101101444322223---1687548445000001332223334444314788998764320120
Q gi|254780604|r 223 SCGAGIS-EREGIMNRITIISGTLAKGFGTF---GGYIAASENLCDFIRSFASGFIFSTSLPPAIASASVTSIQYIKQHY 298 (401)
Q Consensus 223 ~~G~G~~-~~~g~~~~~di~~~TlsKa~g~~---GG~i~g~~~~~~~l~~~~~~~ifs~~l~p~~~aa~~~al~~l~~~~ 298 (401)
T Consensus 234 RtG~~fa~e~~gv~PD--iv--~~gK~l~gG~~P~~av~~~~~i~~~~~~~~h~~--T~~gnpla~aaa~a~L~~~~~~- 306 (396)
T PRK04073 234 RTGKLFACDWDNVKPD--MY--ILGKALGGGVFPISCVAANRDILGVFTPGSHGS--TFGGNPLACAVSIAALDVIEEE- 306 (396)
T ss_pred CCCCCCCEECCCCCCC--EE--ECCCCCCCCCCCEEEEECCHHHHHHCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHC-
T ss_conf 6576300100468988--01--025345578776058960789996166899760--5488989999999999999875-
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCC---CCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECC
Q ss_conf 16888899998766656644983037---898659999689799999999999737909984048888888721899618
Q gi|254780604|r 299 DERKKYLERVKQLRHSLENKAIPCIP---NESHIIPIMVGDSHKCTQISNILLKEFGIYIQPINYPTVAKKKERLRVTLT 375 (401)
Q Consensus 299 ~~~~~l~~~~~~l~~~L~~~g~~~~~---~~s~Ivpi~~g~~~~~~~~~~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l~ 375 (401)
T Consensus 307 ~l~~~~~~~g~~l~~~L~~l~~~~i~~vRG~Gl~~giel~~~--~~~~~~~~-~~~Gll~~~~-------~~~~ir~~Pp 376 (396)
T PRK04073 307 KLPERSLELGEYFKEQLKEIDNPMIKEVRGRGLFIGVELNEP--ARPYCEAL-KEEGLLCKET-------HETVIRFAPP 376 (396)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEECCC--HHHHHHHH-HHCCEEEEEC-------CCCEEEEECC
T ss_conf 799999999999999998258997487233779999995875--89999999-9499799527-------9998999799
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q ss_conf 5799999999999999999
Q gi|254780604|r 376 PLHTDSDIEHLVSSLENVW 394 (401)
Q Consensus 376 a~ht~edid~~~~~l~~v~ 394 (401)
T Consensus 377 L~it~~eid~~l~~l~~~L 395 (396)
T PRK04073 377 LVISKEELDWALEKIKAVL 395 (396)
T ss_pred CCCCHHHHHHHHHHHHHHH
T ss_conf 3689999999999999985