HHsearch alignment for GI: 254780604 and conserved domain: PRK04311
>PRK04311 selenocysteine synthase; Provisional.
Probab=99.52 E-value=5.5e-12 Score=97.00 Aligned_cols=325 Identities=18% Similarity=0.216 Sum_probs=186.0
Q ss_pred CCEEEEEECC-----CCCCCCCC-CHHHHHHHHHHHHHHC-------CCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCEE
Q ss_conf 9868998114-----47466779-8899999999999829-------877641000276402899999888734997337
Q gi|254780604|r 43 GSRKVTIWCS-----NDYLGMGK-HPKVIENAQRTFEKCG-------IGAGGTRNIAGTNYYHVMLEKELATLHGKKAAL 109 (401)
Q Consensus 43 ~~~~~l~f~s-----ndYLgL~~-~p~v~~a~~~a~~~~G-------~~~~~sr~~~G~~~~~~~LE~~la~~~g~e~al 109 (401)
T Consensus 79 ~lr~VINaTGvvlHTN--LGRapL~~~a~~~v~~~~~~YsnLE~dL~~G~RG~R~--------~~v~~ll~~ltgaE~a~ 148 (465)
T PRK04311 79 SLRPVINATGVVLHTN--LGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRD--------RALAALLCELTGAEDAL 148 (465)
T ss_pred CCEEEEECCCEEECCC--CCCCCCCHHHHHHHHHHHCCCCHHHHECCCCCCCCCH--------HHHHHHHHHHHCCCEEE
T ss_conf 6412563420575466--7777788999999999962872155220138898708--------99999999854987379
Q ss_pred EEECCCCCHHHHHCCCCCCCCCEEEEHHHHHH----HHHHHHHHHCCCCEEEECCCC---HHHHHHHHHHCCCCCCCE-E
Q ss_conf 74056520122202346778872342132111----675201453165135316799---889888674066335623-6
Q gi|254780604|r 110 IFNSGYIANWATIGTLCSQIDNIICFSDSHNH----ASIIEGINKARCKKVIWNHND---LEDLEKNLAATDLSIPKI-I 181 (401)
Q Consensus 110 ~~~SG~~An~~~i~~l~~~~d~ii~~~D~~~H----aSi~~g~~l~~a~~~~f~HnD---~~~Le~~L~~~~~~~~~i-I 181 (401)
T Consensus 149 vVNNNAaAv~L~l~~la~gk-EviVSRGelvEIGGsFRiPdim~~sGa~L~EVGtTNrT~l~DY~~AI~---~~Ta~llk 224 (465)
T PRK04311 149 VVNNNAAAVLLALNALAAGK-EVIVSRGELVEIGGAFRIPDVMRQAGAKLVEVGTTNRTHLRDYEDAIN---ENTALLLK 224 (465)
T ss_pred EECCCHHHHHHHHHHHHCCC-EEEEECCCEEEECCCCCCHHHHHHCCCEEEECCCCCCCCHHHHHHHCC---CCCEEEEE
T ss_conf 98284899999999862798-599964535652676562789986598887437678888799998649---56548999
Q ss_pred ECCCCCCCCCC--HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHH-HHHHHH----HHCCCCCCHHHCCCCCCCCC-CE
Q ss_conf 21674356773--368999999840147189971211001256025-899999----72020010110144432222-31
Q gi|254780604|r 182 IFESIYSMDGD--IAPIKEICDLADQYNAITYIDEVHAVGIHGSCG-AGISER----EGIMNRITIISGTLAKGFGT-FG 253 (401)
Q Consensus 182 v~e~v~Sm~G~--~apL~~l~~l~~~~~~~LivDEAH~~Gv~G~~G-~G~~~~----~g~~~~~di~~~TlsKa~g~-~G 253 (401)
T Consensus 225 vH~SN~~i~GFt~~v~~~eL~~l~~~~~ip~~~Dl--GSG~l~~~~~~gl~~Ep~v~~~l~~GaDLVtFSGDKLLGGPQA 302 (465)
T PRK04311 225 VHTSNYRIVGFTKEVSEAELAALGKEHGLPVVVDL--GSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQA 302 (465)
T ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC--CCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCC
T ss_conf 95687654674688999999999987599279988--8752136531269999988999972998899855401479854
Q ss_pred EEEECCHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHHHHHHHHC-C------H------HHHHHHHHHHHHHHHHHHHC
Q ss_conf 68754844500000133--22233344443147889987643201-2------0------16888899998766656644
Q gi|254780604|r 254 GYIAASENLCDFIRSFA--SGFIFSTSLPPAIASASVTSIQYIKQ-H------Y------DERKKYLERVKQLRHSLENK 318 (401)
Q Consensus 254 G~i~g~~~~~~~l~~~~--~~~ifs~~l~p~~~aa~~~al~~l~~-~------~------~~~~~l~~~~~~l~~~L~~~ 318 (401)
T Consensus 303 GIIvGkk~lI~~lkknPL~RAlR----vDKltLaaLeaTL~~Yl~~~~~~~~IP~l~mLt~~~~~L~~rA~~l~~~l~~~ 378 (465)
T PRK04311 303 GIIVGKKELIERLKKHPLKRALR----VDKLTLAALEATLRLYLNPERLAEKIPTLRLLTRSPEELRARAERLAAALKAA 378 (465)
T ss_pred CEEECHHHHHHHHHHCCCHHHHC----CCHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 33740099999998687614232----59999999999999995921000117689987599999999999999998742
Q ss_pred ----CCCCCCCCC-------C-----EEEEEE-CCHHHHHHHHHHHHHHCCEEEEEECCCCCC-CCCCEEEEECCCCCCH
Q ss_conf ----983037898-------6-----599996-897999999999997379099840488888-8872189961857999
Q gi|254780604|r 319 ----AIPCIPNES-------H-----IIPIMV-GDSHKCTQISNILLKEFGIYIQPINYPTVA-KKKERLRVTLTPLHTD 380 (401)
Q Consensus 319 ----g~~~~~~~s-------~-----Ivpi~~-g~~~~~~~~~~~lL~e~Gi~v~~i~~PtVp-~g~~rlRi~l~a~ht~ 380 (401)
T Consensus 379 ~~~~~v~i~~~~s~vGGGslP~~~lpS~~v~i~~~~~s~~~L~~~-LR~~~~-------PII~RI~~d~~~LDlR-Ti~~ 449 (465)
T PRK04311 379 LGEFAVSVVPSFSQVGGGSLPVDRLPSAALTLTPKGRSLEALAAR-LRLLPP-------PVIGRIEDGRLLLDLR-TLEE 449 (465)
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH-HHCCCC-------CEEEEEECCEEEEEEC-CCCH
T ss_conf 578428999776645788787887886799985799999999999-836999-------8899998897999916-3897
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999997
Q gi|254780604|r 381 SDIEHLVSSLENVWQK 396 (401)
Q Consensus 381 edid~~~~~l~~v~~~ 396 (401)
T Consensus 450 ~d~~~i~~~l~~il~~ 465 (465)
T PRK04311 450 EDEEALAAALLELLNK 465 (465)
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 8999999999999619