HHsearch alignment for GI: 254780604 and conserved domain: PRK05093
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed.
Probab=100.00 E-value=1e-32 Score=230.39 Aligned_cols=349 Identities=18% Similarity=0.194 Sum_probs=242.8
Q ss_pred CCCCCEEECCCCCCCCCCCCEEEECCCCEEEEEECC---CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHH
Q ss_conf 399753500134555576310231479868998114---47466779889999999999982987764100027640289
Q gi|254780604|r 17 EKRYRFFTELAYEQYQFPYAIHNSDEGSRKVTIWCS---NDYLGMGKHPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHV 93 (401)
Q Consensus 17 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~s---ndYLgL~~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~ 93 (401)
T Consensus 16 ~~~y~p~pi-vi~ra~---G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~I~~Ai~~Q~~~l~-~~--~~~~--~~~~~~ 85 (403)
T PRK05093 16 VPNYAPAAF-IPVRGE---GSRVWDQQGREYIDFAGGIAVTALGH-CHPALVKALKEQGEKLW-HI--SNVF--TNEPAL 85 (403)
T ss_pred CCCCCCCCC-CEEEEE---CCEEEECCCCEEEECCCCHHHCEECC-CCHHHHHHHHHHHHHCC-CC--CCCC--CCHHHH
T ss_conf 587999983-089856---29899799799999550888503289-97999999999987557-77--5741--488999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCHHHHHCCC-------CCCCC-CEEEEHHHHHHHHHHHHHHHCCC------------
Q ss_conf 99998887349973377405652012220234-------67788-72342132111675201453165------------
Q gi|254780604|r 94 MLEKELATLHGKKAALIFNSGYIANWATIGTL-------CSQID-NIICFSDSHNHASIIEGINKARC------------ 153 (401)
Q Consensus 94 ~LE~~la~~~g~e~al~~~SG~~An~~~i~~l-------~~~~d-~ii~~~D~~~HaSi~~g~~l~~a------------ 153 (401)
T Consensus 86 ~lae~L~~~~~~drv~f~~SGSEAvE~AiklAr~~~~~~~~~~r~~ii~~-~~~yHG~t~~a~s~~g~~~~~~~~~p~~~ 164 (403)
T PRK05093 86 RLAKKLVDATFAERVFFANSGAEANEAALKLARRYACDRHGPEKTEIIAF-HNSFHGRTLFTVSVGGQPKYSDGFGPKPA 164 (403)
T ss_pred HHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-CCCCCCCCHHHHHHCCCCHHCCCCCCCCC
T ss_conf 99999864168775998386778999999999999997289987547777-58868883687762588011027789997
Q ss_pred CEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHH----HHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHH-
Q ss_conf 135316799889888674066335623621674356773368----999999840147189971211001256025899-
Q gi|254780604|r 154 KKVIWNHNDLEDLEKNLAATDLSIPKIIIFESIYSMDGDIAP----IKEICDLADQYNAITYIDEVHAVGIHGSCGAGI- 228 (401)
Q Consensus 154 ~~~~f~HnD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~ap----L~~l~~l~~~~~~~LivDEAH~~Gv~G~~G~G~- 228 (401)
T Consensus 165 ~~~~~p~~d~~~l~~~~~~---~i-aAviiEPi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-~GRtG~~fa 238 (403)
T PRK05093 165 DITHVPFNDLAALKAVIDD---KT-CAVVVEPIQGEGGVIPATPEFLQGLRELCDKHNALLIFDEVQ-TG-MGRTGDLYA 238 (403)
T ss_pred CCEECCCCCHHHHHHCCCC---CE-EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEE-EC-CCCCCCCCC
T ss_conf 7565563368888603377---44-799995766789975899999999998630168379860134-26-887777522
Q ss_pred HHHHHCCCCCCHHHCCCCCCCCC--CEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 99972020010110144432222--3168754844500000133222333444431478899876432012016888899
Q gi|254780604|r 229 SEREGIMNRITIISGTLAKGFGT--FGGYIAASENLCDFIRSFASGFIFSTSLPPAIASASVTSIQYIKQHYDERKKYLE 306 (401)
Q Consensus 229 ~~~~g~~~~~di~~~TlsKa~g~--~GG~i~g~~~~~~~l~~~~~~~ifs~~l~p~~~aa~~~al~~l~~~~~~~~~l~~ 306 (401)
T Consensus 239 ~e~~gv~PD--iv--~~gKglggG~Plsav~~~~~i~~~~~~~~~g~T~--~g~pla~aaala~L~~i~~~-~l~~~a~~ 311 (403)
T PRK05093 239 YMHYGVTPD--IL--TSAKALGGGFPIGAMLTTAEIASHFKVGTHGSTY--GGNPLACAVAEAVFDIINTP-EVLEGVKA 311 (403)
T ss_pred CCCCCCCCC--EE--EECCCCCCCCCEEEEEECHHHHHHCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHC-CHHHHHHH
T ss_conf 236898998--89--9730015886427998728878650787726589--85899999999999999634-49999999
Q ss_pred HHHHHHHHHHHC--CCCCC---CCCCCEEEEEECCH--HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf 998766656644--98303---78986599996897--999999999997379099840488888887218996185799
Q gi|254780604|r 307 RVKQLRHSLENK--AIPCI---PNESHIIPIMVGDS--HKCTQISNILLKEFGIYIQPINYPTVAKKKERLRVTLTPLHT 379 (401)
Q Consensus 307 ~~~~l~~~L~~~--g~~~~---~~~s~Ivpi~~g~~--~~~~~~~~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l~a~ht 379 (401)
T Consensus 312 ~G~~l~~~L~~l~~~~~~i~~VRG~Glm~giel~~~~~~~a~~i~~~~~-~~Gll~~~-------~g~n~irl~PPL~it 383 (403)
T PRK05093 312 REQRFVDGLQKINEKYGVFSEIRGKGLLIGAELNEQYKGRARDFLYAAA-EEGVMVLV-------AGPDVLRFAPSLVIP 383 (403)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHH-HCCCEEEC-------CCCCEEEEECCCCCC
T ss_conf 9999999999998628982666541269999965875216999999999-68928952-------799979997884489
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999974
Q gi|254780604|r 380 DSDIEHLVSSLENVWQKM 397 (401)
Q Consensus 380 ~edid~~~~~l~~v~~~l 397 (401)
T Consensus 384 ~~eid~~l~~l~~al~eV 401 (403)
T PRK05093 384 DADIDEGLARFEKAVAKV 401 (403)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999998