HHsearch alignment for GI: 254780604 and conserved domain: PRK05965
>PRK05965 hypothetical protein; Provisional.
Probab=100.00 E-value=7.9e-33 Score=231.06 Aligned_cols=343 Identities=15% Similarity=0.171 Sum_probs=229.5
Q ss_pred CEEEECCCCEEEEEECCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHCC--CCCEEE
Q ss_conf 102314798689981144---746677988999999999998298776410002764028999998887349--973377
Q gi|254780604|r 36 AIHNSDEGSRKVTIWCSN---DYLGMGKHPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELATLHG--KKAALI 110 (401)
Q Consensus 36 ~~~~~~~~~~~~l~f~sn---dYLgL~~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~~~g--~e~al~ 110 (401)
T Consensus 37 G~~l~D~dG~~ylD~~sg~~~~~lGh~-hp~v~~Ai~~Q~~~l~~~---~~~~~~~~~~~~~la~~L~~~~p~~l~~v~f 112 (459)
T PRK05965 37 GAFLTDASGHQLLDAFAGLWCVNVGYG-QESIVEAAAKQMRKLPYA---TGYFHFGSEPAIRLAAELAERAPGSLNHVYF 112 (459)
T ss_pred ECEEEECCCCEEEECCHHHHHHHHHCC-CHHHHHHHHHHHHHCCCC---CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 088995899999886862886565059-799999999999756773---5665668669999999999857888687998
Q ss_pred EECCCCCHHHHHCC------C-CCCC-CCEEEEHHHHHHHHHHHHHHHCCCC--------------EE----EECC----
Q ss_conf 40565201222023------4-6778-8723421321116752014531651--------------35----3167----
Q gi|254780604|r 111 FNSGYIANWATIGT------L-CSQI-DNIICFSDSHNHASIIEGINKARCK--------------KV----IWNH---- 160 (401)
Q Consensus 111 ~~SG~~An~~~i~~------l-~~~~-d~ii~~~D~~~HaSi~~g~~l~~a~--------------~~----~f~H---- 160 (401)
T Consensus 113 ~~SGSEAvE~AlKlar~y~~a~g~~~r~~ii~~-~~syHG~T~~~~slt~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 191 (459)
T PRK05965 113 TLGGSDAVDSAVRFITHYWNATGRPSKKQFIAL-ERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHHIPSPYAYRNPVGD 191 (459)
T ss_pred ECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-ECCCCCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
T ss_conf 486799999999999999997279987579997-1785899743102577743223568999986235788655687889
Q ss_pred -------CCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHH----HHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHH
Q ss_conf -------99889888674066335623621674356773368----9999998401471899712110012560258999
Q gi|254780604|r 161 -------NDLEDLEKNLAATDLSIPKIIIFESIYSMDGDIAP----IKEICDLADQYNAITYIDEVHAVGIHGSCGAGIS 229 (401)
Q Consensus 161 -------nD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~ap----L~~l~~l~~~~~~~LivDEAH~~Gv~G~~G~G~~ 229 (401)
T Consensus 192 ~~~~~~~~~~~~l~~~i~~~~~~~vAAvi~EPi~g~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~-TG-fGRtG~~fa 269 (459)
T PRK05965 192 DPQAIIAASVAALEAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVI-TG-FGRTGPLFA 269 (459)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECC-CC-CCCCCCCCC
T ss_conf 7788999999999999986188757999954644668853287688799999987569179983054-17-762447410
Q ss_pred -HHHHCCCCCCHHHCCCCCCCCCC---EEEEECCHHHHHHHHCCCC---C--CCCCCCCCCHHHHHHHHHHHHHHCCHHH
Q ss_conf -99720200101101444322223---1687548445000001332---2--2333444431478899876432012016
Q gi|254780604|r 230 -EREGIMNRITIISGTLAKGFGTF---GGYIAASENLCDFIRSFAS---G--FIFSTSLPPAIASASVTSIQYIKQHYDE 300 (401)
Q Consensus 230 -~~~g~~~~~di~~~TlsKa~g~~---GG~i~g~~~~~~~l~~~~~---~--~ifs~~l~p~~~aa~~~al~~l~~~~~~ 300 (401)
T Consensus 270 ~e~~gv~PD--iv--~~gKgL~gG~~Plsav~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla~Aaa~a~L~~l~~~-~l 344 (459)
T PRK05965 270 CEAEGVVPD--LM--TVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEG-GL 344 (459)
T ss_pred CCCCCCCCC--EE--EECCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CH
T ss_conf 036661888--88--87343457867516897648999876115665654456778998989999999999999863-49
Q ss_pred HHHHHHHHHHHHHHHHHCC-CCCC---CCCCCEEEEEE-CC----------HHHHHHHHHHHHHHCCEEEEEECCCCCCC
Q ss_conf 8888999987666566449-8303---78986599996-89----------79999999999973790998404888888
Q gi|254780604|r 301 RKKYLERVKQLRHSLENKA-IPCI---PNESHIIPIMV-GD----------SHKCTQISNILLKEFGIYIQPINYPTVAK 365 (401)
Q Consensus 301 ~~~l~~~~~~l~~~L~~~g-~~~~---~~~s~Ivpi~~-g~----------~~~~~~~~~~lL~e~Gi~v~~i~~PtVp~ 365 (401)
T Consensus 345 ~~~~~~~g~~l~~~L~~L~~~p~i~dVRG~GLm~gielv~d~~~~~~~~~~~~~~~~i~~~~~-~~Glli~~~------- 416 (459)
T PRK05965 345 LANGQAAAPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKASKTPFDAALEPADRIFDRAY-ANGLVFRAF------- 416 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH-HCCEEEEEC-------
T ss_conf 999999999999999987649976867825627999971265446677554799999999999-699299807-------
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 872189961857999999999999999999743
Q gi|254780604|r 366 KKERLRVTLTPLHTDSDIEHLVSSLENVWQKMN 398 (401)
Q Consensus 366 g~~rlRi~l~a~ht~edid~~~~~l~~v~~~l~ 398 (401)
T Consensus 417 g~~vl~l~PPL~It~~eid~~~~~l~~al~evl 449 (459)
T PRK05965 417 GDGVLGFAPALCCTEGEFDLIFERTRKTLDDVL 449 (459)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999899978820899999999999999999998