HHsearch alignment for GI: 254780604 and conserved domain: PRK07865
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed.
Probab=99.89 E-value=1e-20 Score=153.11 Aligned_cols=320 Identities=18% Similarity=0.141 Sum_probs=194.0
Q ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHC----CC----CCEEEEECCC
Q ss_conf 868998114474667798899999999999829877641000276402899999888734----99----7337740565
Q gi|254780604|r 44 SRKVTIWCSNDYLGMGKHPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELATLH----GK----KAALIFNSGY 115 (401)
Q Consensus 44 ~~~~l~f~sndYLgL~~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~~~----g~----e~al~~~SG~ 115 (401)
T Consensus 26 ~~~vI~l~iG~P-d~p~P~~v~~a~~~a~~~~~---------Y~~~~G~~~LReAIa~~~~~~~g~~~~~~~~V~vt~Ga 95 (364)
T PRK07865 26 PDGIVDLSVGTP-VDPVPPVIQEALAAAADAPG---------YPTTAGTPELREAIVAWLARRYGVTGLDPAAVLPVIGS 95 (364)
T ss_pred CCCEEECCCCCC-CCCCCHHHHHHHHHHCCCCC---------CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCH
T ss_conf 998398569899-89989999999996248999---------89988879999999999999839898996879976988
Q ss_pred CCHHHHH-CCC-CCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCH
Q ss_conf 2012220-234-67788723421321116752014531651353167998898886740663356236216743567733
Q gi|254780604|r 116 IANWATI-GTL-CSQIDNIICFSDSHNHASIIEGINKARCKKVIWNHNDLEDLEKNLAATDLSIPKIIIFESIYSMDGDI 193 (401)
Q Consensus 116 ~An~~~i-~~l-~~~~d~ii~~~D~~~HaSi~~g~~l~~a~~~~f~HnD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~ 193 (401)
T Consensus 96 ~~~l~~l~~~l~~~pGD~Vlip~--P~Yp~y~~~~~~~g~~~v~~-----d~~~~----~~~~~~~li~lnsP~NPTG~v 164 (364)
T PRK07865 96 KELVAWLPTLLGLGPGDVVVVPE--LAYPTYEVGARLAGATVVRA-----DSLTE----LGPQTPALIWLNSPSNPTGRV 164 (364)
T ss_pred HHHHHHHHHHHCCCCCCEEEECC--CCCCHHHHHHHHCCCEEEEC-----CCHHH----CCCCCCEEEEECCCCCCCCCC
T ss_conf 99999999997079999899866--78601999999819865610-----78877----598775299989996985511
Q ss_pred HH---HHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHH-HH-HHCCCCCCHHHCCCCCCCCCCE---EEEECCHHHHHH
Q ss_conf 68---9999998401471899712110012560258999-99-7202001011014443222231---687548445000
Q gi|254780604|r 194 AP---IKEICDLADQYNAITYIDEVHAVGIHGSCGAGIS-ER-EGIMNRITIISGTLAKGFGTFG---GYIAASENLCDF 265 (401)
Q Consensus 194 ap---L~~l~~l~~~~~~~LivDEAH~~Gv~G~~G~G~~-~~-~g~~~~~di~~~TlsKa~g~~G---G~i~g~~~~~~~ 265 (401)
T Consensus 165 ~s~e~l~~l~~la~~~~i~vi~DE~Y~~l~~~~~~~s~l~p~~~~~~~~~vi~i~S~SK~~~~~GlRiG~i~~~~~li~~ 244 (364)
T PRK07865 165 LGVDHLRKVVAWARERGAVVASDECYLGLGWDAEPVSVLDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAE 244 (364)
T ss_pred CCHHHHHHHHHHHHHCEEEEEECCCHHHHCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHH
T ss_conf 76999999999977671899825425764258988651386442777575799943652306777448999679999999
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHH
Q ss_conf 00133222333444431478899876432012016888899998766656644983037898659999689799999999
Q gi|254780604|r 266 IRSFASGFIFSTSLPPAIASASVTSIQYIKQHYDERKKYLERVKQLRHSLENKAIPCIPNESHIIPIMVGDSHKCTQISN 345 (401)
Q Consensus 266 l~~~~~~~ifs~~l~p~~~aa~~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~g~~~~~~~s~Ivpi~~g~~~~~~~~~~ 345 (401)
T Consensus 245 l~~~~-~~~~~~~-~~~~Q~a~~aal~~~~~~~~~~~~y~~rr~~l~~~L~~~g~~~~~p~G~fy-lw~~~~~~~~~~~~ 321 (364)
T PRK07865 245 LLAVR-KHAGMMV-PAPVQAAMVAALGDDAHVREQRERYARRRAVLLPALEAAGFTVDHSEAGLY-LWATRGEDCWDTVA 321 (364)
T ss_pred HHHHH-HHCCCCC-CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEE-EEEECCCCHHHHHH
T ss_conf 99999-8550237-899999999995793999999999999999999999867976626992279-98888999999999
Q ss_pred HHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9997379099840488888887218996185799999999999999
Q gi|254780604|r 346 ILLKEFGIYIQPINYPTVAKKKERLRVTLTPLHTDSDIEHLVSSLE 391 (401)
Q Consensus 346 ~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l~a~ht~edid~~~~~l~ 391 (401)
T Consensus 322 ~-l~e~gV~v~PG~~F-g~~g~~~vRls~~--~~~e~l~ea~~RLa 363 (364)
T PRK07865 322 W-LAERGILVAPGDFY-GPAGAQHVRVALT--ATDERIAAAVERLT 363 (364)
T ss_pred H-HHHCCEEEECCCCC-CCCCCCEEEEEEC--CCHHHHHHHHHHHC
T ss_conf 9-99799899188743-6899986999965--98999999999868