HHsearch alignment for GI: 254780604 and conserved domain: PRK08960
>PRK08960 hypothetical protein; Provisional.
Probab=99.93 E-value=8e-23 Score=166.71 Aligned_cols=330 Identities=10% Similarity=0.060 Sum_probs=207.1
Q ss_pred CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHCC----C----CCEEEEECC
Q ss_conf 98689981144746677988999999999998298776410002764028999998887349----9----733774056
Q gi|254780604|r 43 GSRKVTIWCSNDYLGMGKHPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELATLHG----K----KAALIFNSG 114 (401)
Q Consensus 43 ~~~~~l~f~sndYLgL~~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~~~g----~----e~al~~~SG 114 (401)
T Consensus 30 ~G~~vi~l~~G~-pdf~~p~~i~~a~~~a~~~~~~~-------Y~~~~G~~~LReaia~~~~~~~g~~~~~d~I~vt~G~ 101 (387)
T PRK08960 30 AGHDVIHLEIGE-PDFTTAAPIVAAGQAALAAGHTR-------YTAARGLPALREAIAGFYAQRYGLDVDPERILVTPGG 101 (387)
T ss_pred CCCCEEECCCCC-CCCCCCHHHHHHHHHHHHCCCCC-------CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEECCCH
T ss_conf 799807889948-99988999999999998538998-------8998772999999999999985899984328980866
Q ss_pred CCCHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEECC-------CCHHHHHHHHHHCCCCCCCEEECCCCC
Q ss_conf 5201222023467788723421321116752014531651353167-------998898886740663356236216743
Q gi|254780604|r 115 YIANWATIGTLCSQIDNIICFSDSHNHASIIEGINKARCKKVIWNH-------NDLEDLEKNLAATDLSIPKIIIFESIY 187 (401)
Q Consensus 115 ~~An~~~i~~l~~~~d~ii~~~D~~~HaSi~~g~~l~~a~~~~f~H-------nD~~~Le~~L~~~~~~~~~iIv~e~v~ 187 (401)
T Consensus 102 ~~al~~~~~~l~~pGD~Vlv~~P~Y--p~~~~~~~~~~~~~~~vp~~~~~~~~~~~~~le~~~~---~~~~~iil~nP~N 176 (387)
T PRK08960 102 SGALLLASSLLVDPGKHWLLADPGY--PCNRHFLRLVEGAAQLVPVGPDTRYQLTPALVERHWD---SDSVGALVASPAN 176 (387)
T ss_pred HHHHHHHHHHHCCCCCEEEEECCCC--CCHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCC---CCCEEEEECCCCC
T ss_conf 9999999999569998799817876--5528999985374499975754477889999997278---7872999768989
Q ss_pred CCCCCHH---HHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCE---EEEECCHH
Q ss_conf 5677336---89999998401471899712110012560258999997202001011014443222231---68754844
Q gi|254780604|r 188 SMDGDIA---PIKEICDLADQYNAITYIDEVHAVGIHGSCGAGISEREGIMNRITIISGTLAKGFGTFG---GYIAASEN 261 (401)
Q Consensus 188 Sm~G~~a---pL~~l~~l~~~~~~~LivDEAH~~Gv~G~~G~G~~~~~g~~~~~di~~~TlsKa~g~~G---G~i~g~~~ 261 (401)
T Consensus 177 P-TG~v~s~~~l~~l~~~a~~~~~~vI~DEiY~~l~~~~~~~---s~~~~~-~~~i~i~S~SK~~~~~G~RiG~~v~p~~ 251 (387)
T PRK08960 177 P-TGTLLSRDELAALSQALKARGGHLVVDEIYHGLTYGVDAA---SVLEVD-DSAFVLNSFSKYFGMTGWRLGWLVAPPA 251 (387)
T ss_pred C-CCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCC---CCCCCC-CCEEEEEECCCCCCCCCCEEEEEEECHH
T ss_conf 8-8631468999999998762397799844614412589865---311367-8779995064325577630589998899
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH--HCCHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCEEEEEECC-
Q ss_conf 500000133222333444431478899876432--01201688889999876665664498303--7898659999689-
Q gi|254780604|r 262 LCDFIRSFASGFIFSTSLPPAIASASVTSIQYI--KQHYDERKKYLERVKQLRHSLENKAIPCI--PNESHIIPIMVGD- 336 (401)
Q Consensus 262 ~~~~l~~~~~~~ifs~~l~p~~~aa~~~al~~l--~~~~~~~~~l~~~~~~l~~~L~~~g~~~~--~~~s~Ivpi~~g~- 336 (401)
T Consensus 252 ~i~~~~~~~~-~~~~~~~~~~Q-~aa~~al~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~~~~~~~P~G~~y~w~~~~~~ 329 (387)
T PRK08960 252 AVPELEKLAQ-NLYISASSMAQ-HAALACFEPETIAILEARRAEFQRRRDFLLPALRELGFGIAVEPQGAFYLYADISAF 329 (387)
T ss_pred HHHHHHHHHH-HCCCCCCCHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC
T ss_conf 9999999998-54377987999-999999621559999999999999999999999975996045898666997888888
Q ss_pred HHHHHHHHHHHHHHCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 79999999999973790998404-888888872189961857999999999999999999
Q gi|254780604|r 337 SHKCTQISNILLKEFGIYIQPIN-YPTVAKKKERLRVTLTPLHTDSDIEHLVSSLENVWQ 395 (401)
Q Consensus 337 ~~~~~~~~~~lL~e~Gi~v~~i~-~PtVp~g~~rlRi~l~a~ht~edid~~~~~l~~v~~ 395 (401)
T Consensus 330 ~~d~~~~~~~ll~~~gV~v~PG~~Fg-~~~~~~~~Rls~~--~~~~~l~eal~RL~~~Lk 386 (387)
T PRK08960 330 GGDAFAFCRHFLETEHVAFTPGLDFG-RHQAGHHVRFAYT--QSLPRLQEAVERIARGLR 386 (387)
T ss_pred CCCHHHHHHHHHHHCCEEEECCHHHC-CCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHC
T ss_conf 99999999999986999997472208-9999998999976--999999999999999966