HHsearch alignment for GI: 254780604 and conserved domain: PRK13238
>PRK13238 tnaA tryptophanase; Provisional.
Probab=99.45 E-value=2.4e-10 Score=86.46 Aligned_cols=298 Identities=19% Similarity=0.242 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCCCCEEEEHHHHHHHHHHHH-HHHCCC--------------CEE
Q ss_conf 89999988873499733774056520122202346778872342132111675201-453165--------------135
Q gi|254780604|r 92 HVMLEKELATLHGKKAALIFNSGYIANWATIGTLCSQIDNIICFSDSHNHASIIEG-INKARC--------------KKV 156 (401)
Q Consensus 92 ~~~LE~~la~~~g~e~al~~~SG~~An~~~i~~l~~~~d~ii~~~D~~~HaSi~~g-~~l~~a--------------~~~ 156 (401)
T Consensus 80 f~~l~~av~di~G~~~~iPtHQGRaAE~Ilf~~l~k~g~~--vp~N--~HFdTTrahie~~G~~~~dl~~~ea~d~~~~~ 155 (461)
T PRK13238 80 YYRLEDAVKDIFGYEYTIPTHQGRAAEQILFPVLIKKGDV--VPSN--YHFDTTRAHIELNGGTAVNLVIDEALDTGSRY 155 (461)
T ss_pred HHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCCCE--ECCC--CCCCCCHHHHHHCCCEEEEEECHHHCCCCCCC
T ss_conf 9999999998729864454566377999999986469978--5788--78565078888539867730544314957678
Q ss_pred EECCC-CHHHHHHHHHHCCCC-CCCEEECCCCCCCCC---CHHHHHHHHHHHHCCCCEEEECCCCC-----------CCC
Q ss_conf 31679-988988867406633-562362167435677---33689999998401471899712110-----------012
Q gi|254780604|r 157 IWNHN-DLEDLEKNLAATDLS-IPKIIIFESIYSMDG---DIAPIKEICDLADQYNAITYIDEVHA-----------VGI 220 (401)
Q Consensus 157 ~f~Hn-D~~~Le~~L~~~~~~-~~~iIv~e~v~Sm~G---~~apL~~l~~l~~~~~~~LivDEAH~-----------~Gv 220 (401)
T Consensus 156 pFKGN~Dl~kLe~~i~~~g~~~I~~v~~tiTnN~~GGQPVSm~Nir~v~~la~~~~ip~~lDaaRfaENAyFIk~RE~gY 235 (461)
T PRK13238 156 PFKGNFDLEKLEALIEEVGADNIPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVLDAARFAENAYFIKQREPGY 235 (461)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCC
T ss_conf 97887799999999987384465489999862687881646899999999999829959986566766457887325312
Q ss_pred CCCHHHHHH-HHHHCCCCCCHHHCCCCC-CCCCCEEEEECCH--HHHHHHHCCCC---CC-CCCCCCCCHHHHHHHHHHH
Q ss_conf 560258999-997202001011014443-2222316875484--45000001332---22-3334444314788998764
Q gi|254780604|r 221 HGSCGAGIS-EREGIMNRITIISGTLAK-GFGTFGGYIAASE--NLCDFIRSFAS---GF-IFSTSLPPAIASASVTSIQ 292 (401)
Q Consensus 221 ~G~~G~G~~-~~~g~~~~~di~~~TlsK-a~g~~GG~i~g~~--~~~~~l~~~~~---~~-ifs~~l~p~~~aa~~~al~ 292 (401)
T Consensus 236 ~d~si~eI~rEmfs---~aDg~tmSaKKD~~vniGG~l~~~d~~~l~~~~~~~~i~~EGf~TY-GGlaGRDmeAlAvGL~ 311 (461)
T PRK13238 236 KDKSIKEITREMFS---YADGLTMSAKKDAMVNIGGLLCFKDDSDLYTKCRTLCILYEGFPTY-GGLAGRDMEALAVGLY 311 (461)
T ss_pred CCCCHHHHHHHHHH---HHHEEEEEECCCCEECCCCEEEECCHHHHHHHHHHHEEECCCCCCC-CCCCHHHHHHHHCCHH
T ss_conf 57999999999984---5237999833012104422899667599999987442420587566-8833877999973578
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCEEEEEE--------CCHHHHHHHHHHHHHHCCEEEEEE-----
Q ss_conf 3201201688889999876665664498303-78986599996--------897999999999997379099840-----
Q gi|254780604|r 293 YIKQHYDERKKYLERVKQLRHSLENKAIPCI-PNESHIIPIMV--------GDSHKCTQISNILLKEFGIYIQPI----- 358 (401)
Q Consensus 293 ~l~~~~~~~~~l~~~~~~l~~~L~~~g~~~~-~~~s~Ivpi~~--------g~~~~~~~~~~~lL~e~Gi~v~~i----- 358 (401)
T Consensus 312 E~~d~dyl~~R-i~qv~yLg~~L~~~GVPvv~P~GGHAv~iDA~~fLPhip~~qfPa~aLa~eLY~~~GIR~vEiGs~~~ 390 (461)
T PRK13238 312 EGMDEDYLAYR-IAQVEYLGEGLEEAGVPVVTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRAVEIGSLLL 390 (461)
T ss_pred HHCCHHHHHHH-HHHHHHHHHHHHHCCCCEECCCCCEEEEEEHHHHCCCCCHHHCCHHHHHHHHHHHCCCCEEEECCHHC
T ss_conf 76077999977-99999999999977997056798518997467856799814481899999999972955787500120
Q ss_pred -CCCCC----CCCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf -48888----8887218996185-7999999999999999999743
Q gi|254780604|r 359 -NYPTV----AKKKERLRVTLTP-LHTDSDIEHLVSSLENVWQKMN 398 (401)
Q Consensus 359 -~~PtV----p~g~~rlRi~l~a-~ht~edid~~~~~l~~v~~~l~ 398 (401)
T Consensus 391 grdp~tg~~~~~~~ELvRLAiPRRvYT~sH~dyva~~l~~l~~~r~ 436 (461)
T PRK13238 391 GRDPDTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKWVKENRE 436 (461)
T ss_pred CCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 5488876657876000024245000358899999999999995676