HHsearch alignment for GI: 254780604 and conserved domain: PRK13355

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional.
Probab=99.83  E-value=2.8e-18  Score=137.53  Aligned_cols=331  Identities=16%  Similarity=0.198  Sum_probs=200.2

Q ss_pred             CCEEEEEEC--CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHC--------CCCCEEEEE
Q ss_conf             986899811--4474667798899999999999829877641000276402899999888734--------997337740
Q gi|254780604|r   43 GSRKVTIWC--SNDYLGMGKHPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELATLH--------GKKAALIFN  112 (401)
Q Consensus        43 ~~~~~l~f~--sndYLgL~~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~~~--------g~e~al~~~  112 (401)
T Consensus       144 ~g~~i~klnignpa~fgf~~p~~~~~~~~~~~~~-~~gy~~s~g~~~-------ar~a~~~~~q~~~~~~~~~~di~~gn  215 (518)
T PRK13355        144 NGTHILKLNIGNPAPFGFRTPDEVVYDMAHQLPD-TEGYSPSKGLFS-------ARKAIMQYAQLKNIPNVDIDDIYTGN  215 (518)
T ss_pred             CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCHH-------HHHHHHHHHHHCCCCCCCHHHEEECC
T ss_conf             4881676347898866888948999999973723-458754557568-------99999999997699998740356547


Q ss_pred             CCCCCHHHHHCCCCCCCCCEEEEHHHHHHHHHHH-HHHHCCCCEEEECC-------CCHHHHHHHHHHCCCCCCCEEECC
Q ss_conf             5652012220234677887234213211167520-14531651353167-------998898886740663356236216
Q gi|254780604|r  113 SGYIANWATIGTLCSQIDNIICFSDSHNHASIIE-GINKARCKKVIWNH-------NDLEDLEKNLAATDLSIPKIIIFE  184 (401)
Q Consensus       113 SG~~An~~~i~~l~~~~d~ii~~~D~~~HaSi~~-g~~l~~a~~~~f~H-------nD~~~Le~~L~~~~~~~~~iIv~e  184 (401)
T Consensus       216 GvSE~i~~am~Alln~GDeVLiP~P~Y---Plyta~v~L~Gg~pV~y~~dEe~~w~PDiedLe~kIT---~kTKAIVInN  289 (518)
T PRK13355        216 GVSELINLSMSALLDDGDEVLVPSPDY---PLWTACVNLAGGTAVHYRCDEESEWYPDIDDIRSKIT---SKTKAIVIIN  289 (518)
T ss_pred             CHHHHHHHHHHHHCCCCCEEEECCCCC---CCHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCC---CCCEEEEEEC
T ss_conf             767999999998368999898259999---7789998860987889874522177889999985357---1557999968


Q ss_pred             CCCCCCCCH---HHHHHHHHHHHCCCCEEEECCCCCCCCCCC-HHHHHHHHHHCCCCC-CHHHCCCCCCCCCCE---EEE
Q ss_conf             743567733---689999998401471899712110012560-258999997202001-011014443222231---687
Q gi|254780604|r  185 SIYSMDGDI---APIKEICDLADQYNAITYIDEVHAVGIHGS-CGAGISEREGIMNRI-TIISGTLAKGFGTFG---GYI  256 (401)
Q Consensus       185 ~v~Sm~G~~---apL~~l~~l~~~~~~~LivDEAH~~Gv~G~-~G~G~~~~~g~~~~~-di~~~TlsKa~g~~G---G~i  256 (401)
T Consensus       290 PNNP-TGAVyS~E~LeeIaeiArehdLiIISDEIY~~LvYDg~~h~Si---asla~d~~~It~NG~SKsyaMtGWRiGwm  365 (518)
T PRK13355        290 PNNP-TGALYPKEVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSI---ASLAPDLFCVTFSGLSKSHMIAGFRAGWM  365 (518)
T ss_pred             CCCC-CCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHCCCCCCCCCCH---HHCCCCCEEEEECCCCCCEECCEEEEEEE
T ss_conf             9898-8878899999999999998596999623022100689863047---67088645999887766633220113665


Q ss_pred             E--CCHHHH-HHH---HCCCCCCCCCCCCCCHHHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCC
Q ss_conf             5--484450-000---01332223334444314788998764---32012016888899998766656644-98303789
Q gi|254780604|r  257 A--ASENLC-DFI---RSFASGFIFSTSLPPAIASASVTSIQ---YIKQHYDERKKYLERVKQLRHSLENK-AIPCIPNE  326 (401)
Q Consensus       257 ~--g~~~~~-~~l---~~~~~~~ifs~~l~p~~~aa~~~al~---~l~~~~~~~~~l~~~~~~l~~~L~~~-g~~~~~~~  326 (401)
T Consensus       366 v~sG~~~~a~~~Ie~l~~Las~~lc--snvpaQ-~A~~aAL~g~qs~~d~~~~~~rl~erRdlv~e~Ln~IpGvscvkP~  442 (518)
T PRK13355        366 MLSGNKRHAKDYIEGLNMLANMRMC--SNVPAQ-SVVQTALGGHQSVKDYTVPGGRLYDQRELVYDMLNAIPGISAVKPK  442 (518)
T ss_pred             EECCCHHHHHHHHHHHHHHHHCCCC--CCHHHH-HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
T ss_conf             4248589999999999998604566--368999-9999986287648999999999999999999998359997658998


Q ss_pred             CCE--EEEE-EC--CHHHHHHHHHHHHHHCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             865--9999-68--979999999999973790998404-888888872189961857999999999999999999743
Q gi|254780604|r  327 SHI--IPIM-VG--DSHKCTQISNILLKEFGIYIQPIN-YPTVAKKKERLRVTLTPLHTDSDIEHLVSSLENVWQKMN  398 (401)
Q Consensus       327 s~I--vpi~-~g--~~~~~~~~~~~lL~e~Gi~v~~i~-~PtVp~g~~rlRi~l~a~ht~edid~~~~~l~~v~~~l~  398 (401)
T Consensus       443 GAFYlFPkID~~~~~i~dDeeFal~LL~Ee~VlVVPGsaF-G-~~~pghfRIsya--ps~e~L~EA~~RI~~FL~~yr  516 (518)
T PRK13355        443 AAFYIFPKIDVKIFNIHSDEQFALDLLHEKHILISHGGAF-N-WDKPDHFRVVYL--PRLGMLEETMDELDDFFSYYR  516 (518)
T ss_pred             EEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC-C-CCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHH
T ss_conf             1589955415344899899999999998589999587544-8-999897999927--999999999999999999865