HHsearch alignment for GI: 254780604 and conserved domain: PRK13355
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional.
Probab=99.83 E-value=2.8e-18 Score=137.53 Aligned_cols=331 Identities=16% Similarity=0.198 Sum_probs=200.2
Q ss_pred CCEEEEEEC--CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHC--------CCCCEEEEE
Q ss_conf 986899811--4474667798899999999999829877641000276402899999888734--------997337740
Q gi|254780604|r 43 GSRKVTIWC--SNDYLGMGKHPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELATLH--------GKKAALIFN 112 (401)
Q Consensus 43 ~~~~~l~f~--sndYLgL~~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~~~--------g~e~al~~~ 112 (401)
T Consensus 144 ~g~~i~klnignpa~fgf~~p~~~~~~~~~~~~~-~~gy~~s~g~~~-------ar~a~~~~~q~~~~~~~~~~di~~gn 215 (518)
T PRK13355 144 NGTHILKLNIGNPAPFGFRTPDEVVYDMAHQLPD-TEGYSPSKGLFS-------ARKAIMQYAQLKNIPNVDIDDIYTGN 215 (518)
T ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCHH-------HHHHHHHHHHHCCCCCCCHHHEEECC
T ss_conf 4881676347898866888948999999973723-458754557568-------99999999997699998740356547
Q ss_pred CCCCCHHHHHCCCCCCCCCEEEEHHHHHHHHHHH-HHHHCCCCEEEECC-------CCHHHHHHHHHHCCCCCCCEEECC
Q ss_conf 5652012220234677887234213211167520-14531651353167-------998898886740663356236216
Q gi|254780604|r 113 SGYIANWATIGTLCSQIDNIICFSDSHNHASIIE-GINKARCKKVIWNH-------NDLEDLEKNLAATDLSIPKIIIFE 184 (401)
Q Consensus 113 SG~~An~~~i~~l~~~~d~ii~~~D~~~HaSi~~-g~~l~~a~~~~f~H-------nD~~~Le~~L~~~~~~~~~iIv~e 184 (401)
T Consensus 216 GvSE~i~~am~Alln~GDeVLiP~P~Y---Plyta~v~L~Gg~pV~y~~dEe~~w~PDiedLe~kIT---~kTKAIVInN 289 (518)
T PRK13355 216 GVSELINLSMSALLDDGDEVLVPSPDY---PLWTACVNLAGGTAVHYRCDEESEWYPDIDDIRSKIT---SKTKAIVIIN 289 (518)
T ss_pred CHHHHHHHHHHHHCCCCCEEEECCCCC---CCHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCC---CCCEEEEEEC
T ss_conf 767999999998368999898259999---7789998860987889874522177889999985357---1557999968
Q ss_pred CCCCCCCCH---HHHHHHHHHHHCCCCEEEECCCCCCCCCCC-HHHHHHHHHHCCCCC-CHHHCCCCCCCCCCE---EEE
Q ss_conf 743567733---689999998401471899712110012560-258999997202001-011014443222231---687
Q gi|254780604|r 185 SIYSMDGDI---APIKEICDLADQYNAITYIDEVHAVGIHGS-CGAGISEREGIMNRI-TIISGTLAKGFGTFG---GYI 256 (401)
Q Consensus 185 ~v~Sm~G~~---apL~~l~~l~~~~~~~LivDEAH~~Gv~G~-~G~G~~~~~g~~~~~-di~~~TlsKa~g~~G---G~i 256 (401)
T Consensus 290 PNNP-TGAVyS~E~LeeIaeiArehdLiIISDEIY~~LvYDg~~h~Si---asla~d~~~It~NG~SKsyaMtGWRiGwm 365 (518)
T PRK13355 290 PNNP-TGALYPKEVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSI---ASLAPDLFCVTFSGLSKSHMIAGFRAGWM 365 (518)
T ss_pred CCCC-CCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHCCCCCCCCCCH---HHCCCCCEEEEECCCCCCEECCEEEEEEE
T ss_conf 9898-8878899999999999998596999623022100689863047---67088645999887766633220113665
Q ss_pred E--CCHHHH-HHH---HCCCCCCCCCCCCCCHHHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCC
Q ss_conf 5--484450-000---01332223334444314788998764---32012016888899998766656644-98303789
Q gi|254780604|r 257 A--ASENLC-DFI---RSFASGFIFSTSLPPAIASASVTSIQ---YIKQHYDERKKYLERVKQLRHSLENK-AIPCIPNE 326 (401)
Q Consensus 257 ~--g~~~~~-~~l---~~~~~~~ifs~~l~p~~~aa~~~al~---~l~~~~~~~~~l~~~~~~l~~~L~~~-g~~~~~~~ 326 (401)
T Consensus 366 v~sG~~~~a~~~Ie~l~~Las~~lc--snvpaQ-~A~~aAL~g~qs~~d~~~~~~rl~erRdlv~e~Ln~IpGvscvkP~ 442 (518)
T PRK13355 366 MLSGNKRHAKDYIEGLNMLANMRMC--SNVPAQ-SVVQTALGGHQSVKDYTVPGGRLYDQRELVYDMLNAIPGISAVKPK 442 (518)
T ss_pred EECCCHHHHHHHHHHHHHHHHCCCC--CCHHHH-HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
T ss_conf 4248589999999999998604566--368999-9999986287648999999999999999999998359997658998
Q ss_pred CCE--EEEE-EC--CHHHHHHHHHHHHHHCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 865--9999-68--979999999999973790998404-888888872189961857999999999999999999743
Q gi|254780604|r 327 SHI--IPIM-VG--DSHKCTQISNILLKEFGIYIQPIN-YPTVAKKKERLRVTLTPLHTDSDIEHLVSSLENVWQKMN 398 (401)
Q Consensus 327 s~I--vpi~-~g--~~~~~~~~~~~lL~e~Gi~v~~i~-~PtVp~g~~rlRi~l~a~ht~edid~~~~~l~~v~~~l~ 398 (401)
T Consensus 443 GAFYlFPkID~~~~~i~dDeeFal~LL~Ee~VlVVPGsaF-G-~~~pghfRIsya--ps~e~L~EA~~RI~~FL~~yr 516 (518)
T PRK13355 443 AAFYIFPKIDVKIFNIHSDEQFALDLLHEKHILISHGGAF-N-WDKPDHFRVVYL--PRLGMLEETMDELDDFFSYYR 516 (518)
T ss_pred EEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC-C-CCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHH
T ss_conf 1589955415344899899999999998589999587544-8-999897999927--999999999999999999865