HHsearch alignment for GI: 254780604 and conserved domain: PRK13578
>PRK13578 ornithine decarboxylase; Provisional.
Probab=99.75 E-value=1.2e-15 Score=120.49 Aligned_cols=295 Identities=17% Similarity=0.140 Sum_probs=169.2
Q ss_pred CCCHHHHHHHHHHHHCCCCCEEEEECCC-CCHHHHHCCCCCCCCCEEEEHHHHHHHHHHHH-HHHCCCCEEEECC--C--
Q ss_conf 6402899999888734997337740565-20122202346778872342132111675201-4531651353167--9--
Q gi|254780604|r 88 TNYYHVMLEKELATLHGKKAALIFNSGY-IANWATIGTLCSQIDNIICFSDSHNHASIIEG-INKARCKKVIWNH--N-- 161 (401)
Q Consensus 88 ~~~~~~~LE~~la~~~g~e~al~~~SG~-~An~~~i~~l~~~~d~ii~~~D~~~HaSi~~g-~~l~~a~~~~f~H--n-- 161 (401)
T Consensus 172 h~G~~~eAq~~AA~~FGAD~TyFvvNGTS~~nk~v~~a~~~pGD~VLv--dRN~HKSv~~GALIlsGA~PVYl~p~rN~~ 249 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLF--DRNNHKSNHHGALIQAGATPVYLETARNPF 249 (720)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEE--CCCCHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 788447999999998499826999577108899999974589999996--564357777788986697679966646756
Q ss_pred -----------CHHHHHHHHHHCCC-----CCC--CEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCC--C
Q ss_conf -----------98898886740663-----356--236216743567733689999998401471899712110012--5
Q gi|254780604|r 162 -----------DLEDLEKNLAATDL-----SIP--KIIIFESIYSMDGDIAPIKEICDLADQYNAITYIDEVHAVGI--H 221 (401)
Q Consensus 162 -----------D~~~Le~~L~~~~~-----~~~--~iIv~e~v~Sm~G~~apL~~l~~l~~~~~~~LivDEAH~~Gv--~ 221 (401)
T Consensus 250 GiiggI~~~~f~~~~i~~~I~~~~~~~a~~~~p~~~aVit~~TY--dGi~yn~~~I~~~i~~~~~~ilfDEAw~-~~~~F 326 (720)
T PRK13578 250 GFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAIIQLGTY--DGTIYNARQVVDKIGHLCDYILFDSAWV-GYEQF 326 (720)
T ss_pred CEECCCCHHHCCHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCC--CCEEECHHHHHHHHHHHCCEEEEECCHH-HHHHC
T ss_conf 51167485752757789888743633312348861899946875--3542349999999864078389851102-14432
Q ss_pred CCHHHH---HHHHHHCCCCCCHHHCCCCCCCCC--CEEEEECCH-------HHHHHHH-CCCCCCCCCCCCCCHHHHHHH
Q ss_conf 602589---999972020010110144432222--316875484-------4500000-133222333444431478899
Q gi|254780604|r 222 GSCGAG---ISEREGIMNRITIISGTLAKGFGT--FGGYIAASE-------NLCDFIR-SFASGFIFSTSLPPAIASASV 288 (401)
Q Consensus 222 G~~G~G---~~~~~g~~~~~di~~~TlsKa~g~--~GG~i~g~~-------~~~~~l~-~~~~~~ifs~~l~p~~~aa~~ 288 (401)
T Consensus 327 ~P~~~d~~p~~l~~gaddp~i~vtQStHK~LaafSQaS~IHvkd~hI~g~~r~v~~~rfn~a~mmh~STSPsY~L~ASLD 406 (720)
T PRK13578 327 IPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRFNNAFMLHASTSPFYPLFAALD 406 (720)
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 85311246433345877765046630655544322221012245434666566788999999987707880899999879
Q ss_pred HHHHHHH--CCHHHHHHHHHHHHHHHHHHHHC-------------C-----------------CCCCCCC----------
Q ss_conf 8764320--12016888899998766656644-------------9-----------------8303789----------
Q gi|254780604|r 289 TSIQYIK--QHYDERKKYLERVKQLRHSLENK-------------A-----------------IPCIPNE---------- 326 (401)
Q Consensus 289 ~al~~l~--~~~~~~~~l~~~~~~l~~~L~~~-------------g-----------------~~~~~~~---------- 326 (401)
T Consensus 407 v~A~m~~g~~G~~L~~e~i~~aie~Rk~il~~~~~~k~~~p~~v~g~~~~~~~~e~l~~d~~~w~~~Pg~~WHGf~g~~~ 486 (720)
T PRK13578 407 VNAKMHEGESGRRLWMDCVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAE 486 (720)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCC
T ss_conf 99999731214589999999999999999865444225575212686035488888612501024688742246555576
Q ss_pred -----CCE-EEEEEC----C-------HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf -----865-999968----9-------79999999999973790998404888888872189961857999999999999
Q gi|254780604|r 327 -----SHI-IPIMVG----D-------SHKCTQISNILLKEFGIYIQPINYPTVAKKKERLRVTLTPLHTDSDIEHLVSS 389 (401)
Q Consensus 327 -----s~I-vpi~~g----~-------~~~~~~~~~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l~a~ht~edid~~~~~ 389 (401)
T Consensus 487 ~~~~lDP~Klti~tPGi~~~~g~~~~~GIpA~il~-~yLre~gIvvEkt-------dl~~ILfL~T~G~t~~k~~~Lv~a 558 (720)
T PRK13578 487 DQYFVDPCKLLLTTPGIDAETGEYEDFGVPATILA-NYLRENGIVPEKC-------DLNSILFLLTPAEDMAKLQQLVAM 558 (720)
T ss_pred CCEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHH-HHHHHCCCEEEEC-------CCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 63422673799853674556654213687589999-9998769079854-------775079997267888999999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780604|r 390 LENVWQ 395 (401)
Q Consensus 390 l~~v~~ 395 (401)
T Consensus 559 L~~fe~ 564 (720)
T PRK13578 559 LARFEK 564 (720)
T ss_pred HHHHHH
T ss_conf 999997