HHsearch alignment for GI: 254780604 and conserved domain: TIGR00508
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase; InterPro: IPR005815 All members of the seed alignment have been demonstrated experimentally to act as (2.6.1.62 from EC), an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae. ; GO: 0004015 adenosylmethionine-8-amino-7-oxononanoate transaminase activity, 0009102 biotin biosynthetic process.
Probab=98.26 E-value=2.4e-05 Score=54.27 Aligned_cols=340 Identities=21% Similarity=0.296 Sum_probs=183.0
Q ss_pred CEEEECCCCE----EEEEECCCCCCCCC--CCHHHHHHHHHHHHHHCCCCCCCHHCCC-CCCHHHHHHHHHHHHCCC--C
Q ss_conf 1023147986----89981144746677--9889999999999982987764100027-640289999988873499--7
Q gi|254780604|r 36 AIHNSDEGSR----KVTIWCSNDYLGMG--KHPKVIENAQRTFEKCGIGAGGTRNIAG-TNYYHVMLEKELATLHGK--K 106 (401)
Q Consensus 36 ~~~~~~~~~~----~~l~f~sndYLgL~--~~p~v~~a~~~a~~~~G~~~~~sr~~~G-~~~~~~~LE~~la~~~g~--e 106 (401)
T Consensus 36 g~~~~~~~g~p~~~~~~d~~~~ww~~~~g~~~p~~~~~~~~~~~~~~~~-----~~gg~~~~~~~~~~~~~~~~~~~~~~ 110 (466)
T TIGR00508 36 GVELTLEDGRPVDVRLIDGLSSWWAAIHGYNHPRLNAAAQKQLDKLSHV-----LFGGLTHEPAVELCRKLLKLTPEPLD 110 (466)
T ss_pred CEEEEECCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-----HHCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 4168863788420333211013455440577524567888878765555-----52354431578999999973463100
Q ss_pred CEEEEECCCCCHHHHHCCC----CCCCC----CE----------------EEEHHHHHH---------------HHHHHH
Q ss_conf 3377405652012220234----67788----72----------------342132111---------------675201
Q gi|254780604|r 107 AALIFNSGYIANWATIGTL----CSQID----NI----------------ICFSDSHNH---------------ASIIEG 147 (401)
Q Consensus 107 ~al~~~SG~~An~~~i~~l----~~~~d----~i----------------i~~~D~~~H---------------aSi~~g 147 (401)
T Consensus 111 ~~~~~d~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~gd~~~~~~~cdp~~~~~~~~~~~~~~~~~~~~p~~~~g 190 (466)
T TIGR00508 111 CVFLADSGSVAVEVALKLALQYWKGKGEPERTKFLTLRNGYHGDTFGALSVCDPENGLHSLWKGYLPENLFAPAPSIVDG 190 (466)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCCCCCCCCCEECCCCCCHHHHHCCCCCHHHHCCCCCHHCC
T ss_conf 45530576402466778877654202411132100000454554334211026653212332022220221256511115
Q ss_pred HHHCCCCEE-EECCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCH-----HHHHHHHHHHHCCCCEEEECCCCCCCCC
Q ss_conf 453165135-3167998898886740663356236216743567733-----6899999984014718997121100125
Q gi|254780604|r 148 INKARCKKV-IWNHNDLEDLEKNLAATDLSIPKIIIFESIYSMDGDI-----APIKEICDLADQYNAITYIDEVHAVGIH 221 (401)
Q Consensus 148 ~~l~~a~~~-~f~HnD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~-----apL~~l~~l~~~~~~~LivDEAH~~Gv~ 221 (401)
T Consensus 191 ~p~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~gg~~~~~p~~~~~~~~~~~~~~~~~~~d~~-~~g-~ 268 (466)
T TIGR00508 191 LPTSQVRFDEEWNEEDISPLAKLLELHGDETVAAVILEPIVQGAGGLRFYHPTYLKRVRALCKKYGLLLIADEI-ATG-F 268 (466)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEHHH-HHC-C
T ss_conf 65555677653104567789999985225401123334444045764102378999999986442010220113-203-5
Q ss_pred CCHHHHHH-HHHH-------CCC------CCCHHHCCCCCCCCCCEEEEEC-----CHHHHHHHHCCCC--CCCCCC---
Q ss_conf 60258999-9972-------020------0101101444322223168754-----8445000001332--223334---
Q gi|254780604|r 222 GSCGAGIS-EREG-------IMN------RITIISGTLAKGFGTFGGYIAA-----SENLCDFIRSFAS--GFIFST--- 277 (401)
Q Consensus 222 G~~G~G~~-~~~g-------~~~------~~di~~~TlsKa~g~~GG~i~g-----~~~~~~~l~~~~~--~~ifs~--- 277 (401)
T Consensus 269 g~~g~~~~~~~~~~~~~~~g~~p~~~~~~~pd~~--c~g~~~~--gg~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~gp~ 344 (466)
T TIGR00508 269 GRTGKLFACEHAGKYQDQHGISPSDQIKVVPDIL--CLGKALT--GGYLTLSATLTTDKVAETISSGEGPTGGCFLHGPT 344 (466)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCHH--HHCCCCC--CCCEEEEHHHHHHHHHHHHCCCCCCCCCEEECCCC
T ss_conf 7532011012100100102788432201032022--1100003--43000000122345677540677764521321642
Q ss_pred -CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC----CCC---C----CCEEEEEECCHHHHHHHHH
Q ss_conf -444314788998764320120168888999987666566449830----378---9----8659999689799999999
Q gi|254780604|r 278 -SLPPAIASASVTSIQYIKQHYDERKKYLERVKQLRHSLENKAIPC----IPN---E----SHIIPIMVGDSHKCTQISN 345 (401)
Q Consensus 278 -~l~p~~~aa~~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~g~~~----~~~---~----s~Ivpi~~g~~~~~~~~~~ 345 (401)
T Consensus 345 ~~~~p~~c~~~~~~~~~~~~~~-w~~~~~~~~~~~~~~~~p~~~~~~~g~~g~~~~~~~~~g~~g~~~~~~~~~~~~~~~ 423 (466)
T TIGR00508 345 FLGNPLACAVAEASLALLLEGP-WQKQVSAIESQLKRELSPLRKNPDNGLIGTGVKDVRVLGAIGVVELKEPVNVEELQK 423 (466)
T ss_pred CCCCHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 0133245666666788774030-467899998888876643211566652010011222220010100012357888877
Q ss_pred HHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999737909984048888888721899618579999999999999999997
Q gi|254780604|r 346 ILLKEFGIYIQPINYPTVAKKKERLRVTLTPLHTDSDIEHLVSSLENVWQK 396 (401)
Q Consensus 346 ~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l~a~ht~edid~~~~~l~~v~~~ 396 (401)
T Consensus 424 ~~~-~~g~w~~p~g-------~-~~~~~pp~~~~~~~~~~~~~~~~~~~~~ 465 (466)
T TIGR00508 424 GFV-EKGVWIRPFG-------K-LLYLLPPYVITSEELAKLTAALIEALKG 465 (466)
T ss_pred HHH-HCCCEECCCC-------C-EEEECCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 876-4374121135-------3-6564176200448888999999987505