>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

Probab=99.88 E-value=2.6e-20 Score=150.55 Aligned_cols=341 Identities=13% Similarity=0.116 Sum_probs=197.1 Q ss_pred CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHH-HCCC---CCEEEEECCCCCH Q ss_conf 98689981144746677988999999999998298776410002764028999998887-3499---7337740565201 Q gi|254780604|r 43 GSRKVTIWCSNDYLGMGKHPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELAT-LHGK---KAALIFNSGYIAN 118 (401) Q Consensus 43 ~~~~~l~f~sndYLgL~~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~-~~g~---e~al~~~SG~~An 118 (401) T Consensus 31 ~~~dvI~L~iGe-Pdf~~P~~i~~a~~~ai~~~~~~~~~--~gY~~~~G~~~LReaia~~~~~~~~~~d~I~vt~Ga~~~ 107 (402) T TIGR03542 31 PSASVIRLGIGD-TTQPLPASVIEAFHEAVDELASEETY--RGYGPEQGLPALREAIAENDYRGRISPEEIFISDGAKCD 107 (402) T ss_pred CCCCEEECCCCC-CCCCCCHHHHHHHHHHHHHCCCCCCC--CCCCCCCCHHHHHHHHHHHHHCCCCCHHHEEECCCCHHH T ss_conf 899855898999-89998999999999999712246786--777974064999999999975689988996777782999 Q ss_pred HHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEC---CCCHHH---H-HH-HHHHC-CCCCCCEEECCCCCCC Q ss_conf 22202346778872342132111675201453165135316---799889---8-88-67406-6335623621674356 Q gi|254780604|r 119 WATIGTLCSQIDNIICFSDSHNHASIIEGINKARCKKVIWN---HNDLED---L-EK-NLAAT-DLSIPKIIIFESIYSM 189 (401) Q Consensus 119 ~~~i~~l~~~~d~ii~~~D~~~HaSi~~g~~l~~a~~~~f~---HnD~~~---L-e~-~L~~~-~~~~~~iIv~e~v~Sm 189 (401) T Consensus 108 l~~l~a~l~pGD~Vii~~P~y~--~Y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ktk~iiln~P~NP 185 (402) T TIGR03542 108 IGRLQSIFGSDNTVAVQDPVYP--AYVDTAVMTGRAGFADDTGQYRGIVYLPCTKENGFIPELPEERKIDIIYLCSPNNP 185 (402) T ss_pred HHHHHHHHCCCCEEEEECCCCC--CHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCEEEEECCCCCC T ss_conf 9999998399998998388881--57999998599530135665567256767624385722234557359998999798 Q ss_pred CCCHH---HHHHHHHHHHCCCCEEEECCCCCCCCCCCHH-HHHHHHHHCCCCCCHHHCCCCCCCCCCE---EEEECCHHH Q ss_conf 77336---8999999840147189971211001256025-8999997202001011014443222231---687548445 Q gi|254780604|r 190 DGDIA---PIKEICDLADQYNAITYIDEVHAVGIHGSCG-AGISEREGIMNRITIISGTLAKGFGTFG---GYIAASENL 262 (401) Q Consensus 190 ~G~~a---pL~~l~~l~~~~~~~LivDEAH~~Gv~G~~G-~G~~~~~g~~~~~di~~~TlsKa~g~~G---G~i~g~~~~ 262 (401) T Consensus 186 TG~v~s~eel~~i~~la~~~~i~iIsDEiY~~~~~~~~~~~s~~~~~~~-~~~~I~i~S~SK~~~m~G~RiG~~i~p~~l 264 (402) T TIGR03542 186 TGTVLTKEQLKELVDYANAHGSLILFDAAYSAFISDPSIPHSIYEIEGA-KECAIEINSFSKSLGFTGVRLGWTVVPKEL 264 (402) T ss_pred CCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCCCCCCEECCCC-CCEEEECCCCCCCCCCCCCCHHHEECCHHH T ss_conf 8756899999999999875070796022288761689876201113665-213673167624027834054021125877 Q ss_pred HHH----HHC---CCCCCCCCCCCCCHHHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-EEEE Q ss_conf 000----001---3322233344443147889987643--20120168888999987666566449830378986-5999 Q gi|254780604|r 263 CDF----IRS---FASGFIFSTSLPPAIASASVTSIQY--IKQHYDERKKYLERVKQLRHSLENKAIPCIPNESH-IIPI 332 (401) Q Consensus 263 ~~~----l~~---~~~~~ifs~~l~p~~~aa~~~al~~--l~~~~~~~~~l~~~~~~l~~~L~~~g~~~~~~~s~-Ivpi 332 (401) T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a-~~aal~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ga~yl~~ 343 (402) T TIGR03542 265 TYADGHSVIQDWERRLCTTFNGASYPVQRA-AEAAYAGEGLQPILEAISYYMENARILREALEAAGFKVYGGENAPYLWV 343 (402) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHH-HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEE T ss_conf 542279999999999876257755999999-9999737885999999999999999999988756957607997348978 Q ss_pred EECCHHHHHHHHHHHHHHCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH Q ss_conf 968979999999999973790998404-88888887218996185799999999999999999 Q gi|254780604|r 333 MVGDSHKCTQISNILLKEFGIYIQPIN-YPTVAKKKERLRVTLTPLHTDSDIEHLVSSLENVW 394 (401) Q Consensus 333 ~~g~~~~~~~~~~~lL~e~Gi~v~~i~-~PtVp~g~~rlRi~l~a~ht~edid~~~~~l~~v~ 394 (401) T Consensus 344 ~~~~~~~~~~~~~~ll~e~~V~vvPG~~F--G~~g~g~vRls~a--~~~e~l~ea~~Rl~~~L 402 (402) T TIGR03542 344 KTPEGISSWDFFDFLLYQYHIVGTPGSGF--GSSGEGFVRFSAF--GKRENIVAACERIKHAL 402 (402) T ss_pred ECCCCCCHHHHHHHHHHHCCEEEECCHHH--CCCCCCEEEEEEE--CCHHHHHHHHHHHHHHC T ss_conf 78999898999999998599999764476--8999896999972--99999999999999759

HHsearch alignment for GI: 254780604 and conserved domain: TIGR03542