HHsearch alignment for GI: 254780604 and conserved domain: pfam01041

>pfam01041 DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family. The members of this family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA, StsC, and StsS. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase EC:2.6.1.50, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin.
Probab=99.85  E-value=3.7e-19  Score=143.15  Aligned_cols=301  Identities=18%  Similarity=0.228  Sum_probs=191.8

Q ss_pred             HHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCC-CCCCCCEEEEHHHHHH
Q ss_conf             999999999998298776410002764028999998887349973377405652012220234-6778872342132111
Q gi|254780604|r   63 KVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELATLHGKKAALIFNSGYIANWATIGTL-CSQIDNIICFSDSHNH  141 (401)
Q Consensus        63 ~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~~~g~e~al~~~SG~~An~~~i~~l-~~~~d~ii~~~D~~~H  141 (401)
T Consensus         6 ~~~~~v~~~l~s-~-------~~~~~G~~v~~fE~~~~~~~g~k~~v~~~sgT~Al~lal~a~~~~~gdeVi~p--~~t~   75 (363)
T pfam01041         6 EELAAVTEVLRS-G-------WLTTGGPEVREFEKEFAAYLGVKHAVAVSSGTAALHLALRALGIGPGDEVIVP--SFTF   75 (363)
T ss_pred             HHHHHHHHHHHC-C-------CCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEC--CCCC
T ss_conf             999999999973-9-------81479989999999999997849599975889999999998598892999979--9775


Q ss_pred             HHHHHHHHHCCCCEEEEC------CCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf             675201453165135316------79988988867406633562362167435677336899999984014718997121
Q gi|254780604|r  142 ASIIEGINKARCKKVIWN------HNDLEDLEKNLAATDLSIPKIIIFESIYSMDGDIAPIKEICDLADQYNAITYIDEV  215 (401)
Q Consensus       142 aSi~~g~~l~~a~~~~f~------HnD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~apL~~l~~l~~~~~~~LivDEA  215 (401)
T Consensus        76 ~at~~ai~~~G~~pvf~Dvd~~t~~id~~~l~~~i~---~~tkaIi~vh----~~G~~~d~~~i~~~~~~~~i~lIEDaA  148 (363)
T pfam01041        76 VATANAVLYLGAKPVFVDIDPDTYNIDPAAIEAAIT---PRTKAIMPVH----LYGQPADMDAIRAIAAEHGLPVIEDAA  148 (363)
T ss_pred             HHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCC---CCCCEEEEEC----CCCCCCCHHHHHHHHHHCCCEEEEECC
T ss_conf             988999998699799850645656858999998607---5870999878----989868999999999984999997313


Q ss_pred             CCCCCCCCHHHHHHHHHHCCCCCCHHHCCC--CCCCCC-CEEEEECC-HHHHHH---HHCCCCC------------CCCC
Q ss_conf             100125602589999972020010110144--432222-31687548-445000---0013322------------2333
Q gi|254780604|r  216 HAVGIHGSCGAGISEREGIMNRITIISGTL--AKGFGT-FGGYIAAS-ENLCDF---IRSFASG------------FIFS  276 (401)
Q Consensus       216 H~~Gv~G~~G~G~~~~~g~~~~~di~~~Tl--sKa~g~-~GG~i~g~-~~~~~~---l~~~~~~------------~ifs  276 (401)
T Consensus       149 ~a~Ga~~-~gk----~~G~~g--d~~~fSF~~~K~ittGeGG~i~tnd~~l~~~~r~lr~~G~~~~~~~~~~~~~~~G~N  221 (363)
T pfam01041       149 HAHGATY-KGK----RVGTFG--DAATFSFFPTKNITTGEGGAVVTDDPELAERARCLRNHGCGRPANKRYRHEVPLGYN  221 (363)
T ss_pred             CCCCCCC-CCE----ECCCCC--CCCEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
T ss_conf             2026765-865----435644--521020578765446897099969999999999999659688987752245067755


Q ss_pred             CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC-CCCC---C--CC--CEEEEEECCHH--HHHHHHHH
Q ss_conf             44443147889987643201201688889999876665664498-3037---8--98--65999968979--99999999
Q gi|254780604|r  277 TSLPPAIASASVTSIQYIKQHYDERKKYLERVKQLRHSLENKAI-PCIP---N--ES--HIIPIMVGDSH--KCTQISNI  346 (401)
Q Consensus       277 ~~l~p~~~aa~~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~g~-~~~~---~--~s--~Ivpi~~g~~~--~~~~~~~~  346 (401)
T Consensus       222 ~rmseiqAaigl~qL~~l~~~---~~~R~~i~~~Y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~R~~l~~~  298 (363)
T pfam01041       222 YRMTELQAAIGLAQLERLDEF---IARRREIAERYQELLAELPGFEPLTLPTEEDDHAWHLFPVLVPEEAAGSRDELVEA  298 (363)
T ss_pred             CCCCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHH
T ss_conf             676788999999999999999---99999999999998578999410686888875147999999764342339999999


Q ss_pred             HHHHCCEEEEEECCCCCC------------CC---------CCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             997379099840488888------------88---------7218996185799999999999999
Q gi|254780604|r  347 LLKEFGIYIQPINYPTVA------------KK---------KERLRVTLTPLHTDSDIEHLVSSLE  391 (401)
Q Consensus       347 lL~e~Gi~v~~i~~PtVp------------~g---------~~rlRi~l~a~ht~edid~~~~~l~  391 (401)
T Consensus       299 -L~~~gI~t~~~y~~pl~~~~~~~~~~~~~~~~~pna~~l~~~~l~LP~~~~Lt~~di~~I~~~IK  363 (363)
T pfam01041       299 -LKEAGIGTRVHYPIPLHLQPYYEDRVYYAPGDLPNAERLASRVLSLPLYPGLTDEEVDRVAEAVR  363 (363)
T ss_pred             -HHHCCCCEEEECCCCHHHCHHHHHCCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf             -99879955865897134297877456888889989999985989897999889999999998639